swietenialide D



Compound IDCDAMM03023
Common nameswietenialide D
IUPAC name[15-[acetyloxy(furan-3-yl)methyl]-3,13-dihydroxy-6,16-bis(2-methoxy-2-oxoethyl)-5,7,10,15-tetramethyl-2-propanoyloxy-9,11,17-trioxapentacyclo[8.6.1.15,8.01,12.07,12]octadecan-4-yl] 2,3-dimethyloxirane-2-carboxylate
Molecular formulaC40H54O17

Experimental data

Retention time0.51
Adduct[M+H]+
Actual mz807.344
Theoretical mz807.343
Error0.9
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.2048

Identifiers and class information

Inchi keySBOCNDPVWBAYNN-YOPGOPOFSA-N
SmilesO=C(OC(C1=COC=C1)C2(C)CC(O)C34OC5(OC6CC(C)(C(OC(=O)C7(OC7C)C)C(O)C(OC(=O)CC)C3(O5)C2CC(=O)OC)C(CC(=O)OC)C64C)C)C
SuperclassOrganic acids and derivatives
ClassCarboxylic acids and derivatives

Plant source

  • Clitoria ternatea L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)5
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)0
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)13
    Number of reactive functional groups (#rtvFG)7
    Predicted central nervous system activity (CNS)-2
    Molecular weight (mol_MW)806.856
    Computed dipole moment(dipole)6.946
    Total solvent accessible surface area (SASA)891.981
    Hydrophobic component of SASA (FOSA)678.21
    Hydrophilic component of SASA (FISA)139.074
    Pie component of the SASA (PISA)74.697
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)2071.92
    Number of hydrogen bond donors (donorHB)2
    Number of hydrogen bond acceptors (accptHB)18.9
    Free energy of solvation of dipole (dip^2/V)0.0232873
    Index of cohesive interaction in solids (ACxDN^.5/SA)0.0299655
    Globularity descriptor (glob)0.881167
    Predicted polarizability in cubic angstroms (QPpolrz)69.13
    Predicted hexadecane/gas partition coefficient (QPlogPC16)18.297
    Predicted octanol/gas partition coefficient (QPlogPoct)37.04
    Predicted water/gas partition coefficient (QPlogPw)21.998
    Predicted octanol/water partition coefficient (QPlogPo/w)3.462
    Predicted aqueous solubility (QPlogS)-3.3
    Conformation-independent predicted aqueous solubility (CIQPlogS)-7.94
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.811
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)475.399
    Predicted brain/blood partition coefficient (QPlogBB)-1.414
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)221.456
    Predicted skin permeability, log Kp (QPlogKp)-2.571
    PM3 calculated ionization potential (IP(ev))9.332
    PM3 calculated electron affinity (EA(eV))-0.426
    Number of likely metabolic reactions (#metab)7
    Prediction of binding to human serum albumin (QPlogKhsa)-0.045
    Predicted qualitative human oral absorption (HumanOralAbsorption)2
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)69.216
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)215.497
    Number of nitrogen and oxygen atoms (#NandO)17
    Number of violations of Lipinski’s rule of five (RuleOfFive)2
    Number of violations of Jorgensen’s rule of three (RuleOfThree)1

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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