daturametelin A



Compound IDCDAMM02981
Common namedaturametelin A
IUPAC name2-[1-(10,13-dimethyl-1-oxo-4,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-17-yl)ethyl]-4-methyl-5-[[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]-2,3-dihydropyran-6-one
Molecular formulaC34H48O9

Experimental data

Retention time18.18
Adduct[M+H]+
Actual mz601.34
Theoretical mz601.337
Error5.03
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.0266

Identifiers and class information

Inchi keyBUUVUQOPURMCQD-CHTFRFAHSA-N
SmilesO=C1OC(CC(=C1COC2OC(CO)C(O)C(O)C2O)C)C(C)C3CCC4C5CC=C6CC=CC(=O)C6(C)C5CCC34C
SuperclassLipids and lipid-like molecules
ClassSteroids and steroid derivatives

Plant source

  • Clitoria ternatea L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)2
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)0
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)10
    Number of reactive functional groups (#rtvFG)2
    Predicted central nervous system activity (CNS)-2
    Molecular weight (mol_MW)600.748
    Computed dipole moment(dipole)6.025
    Total solvent accessible surface area (SASA)939.121
    Hydrophobic component of SASA (FOSA)587.47
    Hydrophilic component of SASA (FISA)241.014
    Pie component of the SASA (PISA)110.636
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)1813.22
    Number of hydrogen bond donors (donorHB)4
    Number of hydrogen bond acceptors (accptHB)15.2
    Free energy of solvation of dipole (dip^2/V)0.0200194
    Index of cohesive interaction in solids (ACxDN^.5/SA)0.0323707
    Globularity descriptor (glob)0.765732
    Predicted polarizability in cubic angstroms (QPpolrz)61.046
    Predicted hexadecane/gas partition coefficient (QPlogPC16)18.604
    Predicted octanol/gas partition coefficient (QPlogPoct)34.948
    Predicted water/gas partition coefficient (QPlogPw)22.996
    Predicted octanol/water partition coefficient (QPlogPo/w)2.42
    Predicted aqueous solubility (QPlogS)-6.056
    Conformation-independent predicted aqueous solubility (CIQPlogS)-5.705
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.85
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)51.329
    Predicted brain/blood partition coefficient (QPlogBB)-2.78
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)19.971
    Predicted skin permeability, log Kp (QPlogKp)-4.612
    PM3 calculated ionization potential (IP(ev))9.627
    PM3 calculated electron affinity (EA(eV))0.173
    Number of likely metabolic reactions (#metab)9
    Prediction of binding to human serum albumin (QPlogKhsa)0.056
    Predicted qualitative human oral absorption (HumanOralAbsorption)2
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)58.769
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)162.114
    Number of nitrogen and oxygen atoms (#NandO)9
    Number of violations of Lipinski’s rule of five (RuleOfFive)1
    Number of violations of Jorgensen’s rule of three (RuleOfThree)2

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source
    Q9UHC9NPC1L1Niemann-Pick C1-like protein 1T33901SEA
    Q13133NR1H3LXR-alphaT52297SEA
    P11413G6PDGlucose-6-phosphate 1-dehydrogenaseT63484SEA
    P60568IL2Interleukin-2T61698SEA
    P08151GLI1Zinc finger protein GLI1T40890SEA

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
    T33901DI0188Hyper-lipoproteinaemia[ICD-11: 5C80]Q9UHC9NPC1L1
    T52297DI0117Depression[ICD-11: 6A70-6A7Z]Q13133NR1H3
    T63484DI0086Chronic obstructive pulmonary disease[ICD-11: CA22]P11413G6PD
    T61698DI0275Multiple sclerosis[ICD-11: 8A40]P60568IL2
    T61698DI0361Renal cell carcinoma[ICD-11: 2C90]P60568IL2

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