Cyclocanthoside A



Compound IDCDAMM02951
Common nameCyclocanthoside A
IUPAC name2-[[15-(5,6-dihydroxy-6-methylheptan-2-yl)-9,14-dihydroxy-7,7,12,16-tetramethyl-6-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]oxy]oxane-3,4,5-triol
Molecular formulaC35H60O9

Experimental data

Retention time10.35
Adduct[M+H]+
Actual mz625.435
Theoretical mz625.431
Error5.31
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.113

Identifiers and class information

Inchi keyWWWSFRYQXBVZOD-FXPVXXKYNA-N
SmilesOC1COC(OC2CCC34CC54CCC6(C)C(C(O)CC6(C)C5CC(O)C3C2(C)C)C(C)CCC(O)C(O)(C)C)C(O)C1O
SuperclassLipids and lipid-like molecules
ClassSteroids and steroid derivatives

Plant source

  • Clitoria ternatea L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)4
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)0
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)14
    Number of reactive functional groups (#rtvFG)1
    Predicted central nervous system activity (CNS)-2
    Molecular weight (mol_MW)624.854
    Computed dipole moment(dipole)8.096
    Total solvent accessible surface area (SASA)938.515
    Hydrophobic component of SASA (FOSA)696.885
    Hydrophilic component of SASA (FISA)241.63
    Pie component of the SASA (PISA)0
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)1892.13
    Number of hydrogen bond donors (donorHB)7
    Number of hydrogen bond acceptors (accptHB)14.35
    Free energy of solvation of dipole (dip^2/V)0.0346426
    Index of cohesive interaction in solids (ACxDN^.5/SA)0.0404538
    Globularity descriptor (glob)0.788299
    Predicted polarizability in cubic angstroms (QPpolrz)60.58
    Predicted hexadecane/gas partition coefficient (QPlogPC16)18.947
    Predicted octanol/gas partition coefficient (QPlogPoct)38.752
    Predicted water/gas partition coefficient (QPlogPw)24.92
    Predicted octanol/water partition coefficient (QPlogPo/w)2.674
    Predicted aqueous solubility (QPlogS)-5.442
    Conformation-independent predicted aqueous solubility (CIQPlogS)-5.504
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.958
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)50.643
    Predicted brain/blood partition coefficient (QPlogBB)-2.873
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)19.683
    Predicted skin permeability, log Kp (QPlogKp)-4.629
    PM3 calculated ionization potential (IP(ev))10.19
    PM3 calculated electron affinity (EA(eV))-1.918
    Number of likely metabolic reactions (#metab)7
    Prediction of binding to human serum albumin (QPlogKhsa)0.139
    Predicted qualitative human oral absorption (HumanOralAbsorption)2
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)47.192
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)152.185
    Number of nitrogen and oxygen atoms (#NandO)9
    Number of violations of Lipinski’s rule of five (RuleOfFive)2
    Number of violations of Jorgensen’s rule of three (RuleOfThree)1

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source
    P07900HSP90AA1Heat shock protein HSP 90-alphaT18477SwissTargetPrediction
    P49810PSEN2Gamma-secretaseT99204SwissTargetPrediction

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
    T18477DI0015Acute upper respiratory infection[ICD-11: CA07]P07900HSP90AA1
    T18477DI0037Asthma[ICD-11: CA23]P07900HSP90AA1
    T99204DI0320Osteoarthritis[ICD-11: FA00-FA05]P49810PSEN2
    T99204DI0380Shoulder lesion[ICD-11: FB53]P49810PSEN2
    T99204DI0390Soft tissue disorder[ICD-11: FB56]P49810PSEN2

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