Galloylpaeoniflorin



Compound IDCDAMM02924
Common nameGalloylpaeoniflorin
IUPAC name[6-[[2-(benzoyloxymethyl)-6-hydroxy-8-methyl-9,10-dioxatetracyclo[4.3.1.02,5.03,8]decan-3-yl]oxy]-3,4,5-trihydroxyoxan-2-yl]methyl 3,4,5-trihydroxybenzoate
Molecular formulaC30H32O15

Experimental data

Retention time3.72
Adduct[M+H]+
Actual mz633.174
Theoretical mz633.181
Error11.49
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.193

Identifiers and class information

Inchi keyKLFIUQCKSSAFFU-KPYOXDJYNA-N
SmilesO=C(OCC1OC(OC23CC4C5(O)OC(OC2(C)C5)C43COC(=O)C=6C=CC=CC6)C(O)C(O)C1O)C7=CC(O)=C(O)C(O)=C7
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Plant source

  • Clitoria ternatea L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)6
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)0
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)15
    Number of reactive functional groups (#rtvFG)5
    Predicted central nervous system activity (CNS)-2
    Molecular weight (mol_MW)632.574
    Computed dipole moment(dipole)4.209
    Total solvent accessible surface area (SASA)875.039
    Hydrophobic component of SASA (FOSA)235.598
    Hydrophilic component of SASA (FISA)376.949
    Pie component of the SASA (PISA)262.492
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)1682.15
    Number of hydrogen bond donors (donorHB)7
    Number of hydrogen bond acceptors (accptHB)16.05
    Free energy of solvation of dipole (dip^2/V)0.0105315
    Index of cohesive interaction in solids (ACxDN^.5/SA)0.0485285
    Globularity descriptor (glob)0.781713
    Predicted polarizability in cubic angstroms (QPpolrz)54.041
    Predicted hexadecane/gas partition coefficient (QPlogPC16)20.007
    Predicted octanol/gas partition coefficient (QPlogPoct)37.975
    Predicted water/gas partition coefficient (QPlogPw)28.927
    Predicted octanol/water partition coefficient (QPlogPo/w)0.205
    Predicted aqueous solubility (QPlogS)-3.993
    Conformation-independent predicted aqueous solubility (CIQPlogS)-5.863
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-6.316
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2.638
    Predicted brain/blood partition coefficient (QPlogBB)-4.453
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)0.807
    Predicted skin permeability, log Kp (QPlogKp)-6.102
    PM3 calculated ionization potential (IP(ev))9.211
    PM3 calculated electron affinity (EA(eV))0.617
    Number of likely metabolic reactions (#metab)6
    Prediction of binding to human serum albumin (QPlogKhsa)-0.618
    Predicted qualitative human oral absorption (HumanOralAbsorption)1
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)0
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)247.412
    Number of nitrogen and oxygen atoms (#NandO)15
    Number of violations of Lipinski’s rule of five (RuleOfFive)3
    Number of violations of Jorgensen’s rule of three (RuleOfThree)1

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source
    P05121SERPINE1Plasminogen activator inhibitor-1T15556SEA
    Q9NUW8TDP1Tyrosyl-DNA phosphodiesterase 1T33492SEA
    P20916MAGMyelin-associated glycoprotein (by homology)T95286SEA
    Q99417MYCBPMYCBP messenger RNAT37298SEA

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
    T15556DI0037Asthma[ICD-11: CA23]P05121SERPINE1
    T15556DI0405Thrombosis[ICD-11: DB61-GB90]P05121SERPINE1
    T95286DI0219Ischaemic/haemorrhagic stroke[ICD-11: 8B20]P20916MAG
    T37298DI0235Liver cancer[ICD-11: 2C12]Q99417MYCBP

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