Dysoxylin D



Compound IDCDAMM02881
Common nameDysoxylin D
IUPAC name[4,18-diacetyloxy-16-hydroxy-1,5,10,15-tetramethyl-6-(5-oxooxolan-3-yl)-13-oxapentacyclo[10.6.1.02,10.05,9.015,19]nonadec-8-en-11-yl] 3,4-dimethylpent-2-enoate
Molecular formulaC37H52O10

Experimental data

Retention time18.82
Adduct[M+H]+
Actual mz657.364
Theoretical mz657.363
Error0.34
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.2043

Identifiers and class information

Inchi keyGWHCYEGDOGSJQJ-SFMSFHAWNA-N
SmilesO=C(OC1C2OCC3(C)C(O)CC(OC(=O)C)C(C)(C4CC(OC(=O)C)C5(C(=CCC5C6COC(=O)C6)C14C)C)C23)C=C(C)C(C)C
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)3
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)6
Number of reactive functional groups (#rtvFG)4
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)656.812
Computed dipole moment(dipole)13.559
Total solvent accessible surface area (SASA)938.824
Hydrophobic component of SASA (FOSA)757.623
Hydrophilic component of SASA (FISA)170.563
Pie component of the SASA (PISA)10.639
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1932.13
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)12.4
Free energy of solvation of dipole (dip^2/V)0.0951528
Index of cohesive interaction in solids (ACxDN^.5/SA)0.013208
Globularity descriptor (glob)0.799108
Predicted polarizability in cubic angstroms (QPpolrz)67.419
Predicted hexadecane/gas partition coefficient (QPlogPC16)17.383
Predicted octanol/gas partition coefficient (QPlogPoct)32.216
Predicted water/gas partition coefficient (QPlogPw)15.566
Predicted octanol/water partition coefficient (QPlogPo/w)4.98
Predicted aqueous solubility (QPlogS)-7.457
Conformation-independent predicted aqueous solubility (CIQPlogS)-7.735
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.833
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)239.031
Predicted brain/blood partition coefficient (QPlogBB)-1.579
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)105.325
Predicted skin permeability, log Kp (QPlogKp)-4.049
PM3 calculated ionization potential (IP(ev))10.029
PM3 calculated electron affinity (EA(eV))0.087
Number of likely metabolic reactions (#metab)6
Prediction of binding to human serum albumin (QPlogKhsa)1.043
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)85.713
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)162.992
Number of nitrogen and oxygen atoms (#NandO)10
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P17612PRKACAcAMP-dependent protein kinase alpha-catalytic subunitT12808SwissTargetPrediction
Q02156PRKCEProtein kinase C epsilonT00895SwissTargetPrediction
Q05655PRKCDProtein kinase C deltaT44861SwissTargetPrediction

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T12808DI0279Muscular atrophy[ICD-11: 8B61]P17612PRKACA
T00895DI0033Anxiety disorder[ICD-11: 6B00-6B0Z]Q02156PRKCE
T00895DI0243Malaria[ICD-11: 1F40-1F45]Q02156PRKCE
T44861DI0287Myocardial infarction[ICD-11: BA41-BA43]Q05655PRKCD

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