Scortechinone G



Compound IDCDAMM02827
Common nameScortechinone G
IUPAC namemethyl 4-[11-hydroxy-16-methoxy-6,6,7,20,20-pentamethyl-10-(3-methylbut-2-enyl)-13,17-dioxo-3,8,19-trioxahexacyclo[14.4.1.02,14.02,18.04,12.05,9]henicosa-4(12),5(9),10,14-tetraen-18-yl]-2-methylbut-2-enoate
Molecular formulaC35H42O9

Experimental data

Retention time14.26
Adduct[2M+NH4]2+
Actual mz615.296
Theoretical mz615.3
Error5.87
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.8523

Identifiers and class information

Inchi keyGLWVKEXUTBAGCF-UOMJIVGLNA-N
SmilesO=C(OC)C(=CCC12OC(C)(C)C3CC(OC)(C=C4C(=O)C=5C(O)=C(C=6OC(C)C(C6C5OC431)(C)C)CC=C(C)C)C2=O)C
SuperclassOrganoheterocyclic compounds
ClassBenzopyrans

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)7
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)606.711
Computed dipole moment(dipole)5.413
Total solvent accessible surface area (SASA)863.915
Hydrophobic component of SASA (FOSA)674.301
Hydrophilic component of SASA (FISA)148.653
Pie component of the SASA (PISA)40.962
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1754.96
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)8.75
Free energy of solvation of dipole (dip^2/V)0.016694
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.814465
Predicted polarizability in cubic angstroms (QPpolrz)59.976
Predicted hexadecane/gas partition coefficient (QPlogPC16)15.621
Predicted octanol/gas partition coefficient (QPlogPoct)25.007
Predicted water/gas partition coefficient (QPlogPw)10.163
Predicted octanol/water partition coefficient (QPlogPo/w)5.502
Predicted aqueous solubility (QPlogS)-6.867
Conformation-independent predicted aqueous solubility (CIQPlogS)-8.639
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.729
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)385.679
Predicted brain/blood partition coefficient (QPlogBB)-1.352
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)176.648
Predicted skin permeability, log Kp (QPlogKp)-3.443
PM3 calculated ionization potential (IP(ev))9.258
PM3 calculated electron affinity (EA(eV))0.852
Number of likely metabolic reactions (#metab)7
Prediction of binding to human serum albumin (QPlogKhsa)1.075
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)79.535
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)125.711
Number of nitrogen and oxygen atoms (#NandO)9
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P11926ODC1Ornithine decarboxylaseT60366SEA
O15111CHUKInhibitor of NF-kappa-B kinase (IKK)T78429SwissTargetPrediction
P10599TXNThioredoxinT85616SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T60366DI0020African trypanosomiasis[ICD-11: 1F51]P11926ODC1
T78429DI0250Mature B-cell lymphoma[ICD-11: 2A85]O15111CHUK
T85616DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P10599TXN

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