Hirsein A



Compound IDCDAMM02768
Common nameHirsein A
IUPAC name[14-hept-1-enyl-6,7-dihydroxy-8-(hydroxymethyl)-4,18-dimethyl-5-oxo-16-prop-1-en-2-yl-9,13,15,19-tetraoxahexacyclo[12.4.1.01,11.02,6.08,10.012,16]nonadec-3-en-17-yl] 3-phenylprop-2-enoate
Molecular formulaC37H44O10

Experimental data

Retention time18.06
Adduct[M+H]+
Actual mz649.295
Theoretical mz649.3
Error7.36
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.7097

Identifiers and class information

Inchi keySBKXRMYYKDQAMZ-FDCOCQCLNA-N
SmilesO=C(OC1C(C)C23OC4(OC(C3C5OC5(CO)C(O)C6(O)C(=O)C(=CC62)C)C1(O4)C(=C)C)C=CCCCCC)C=CC=7C=CC=CC7
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)2
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)14
Number of reactive functional groups (#rtvFG)3
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)648.749
Computed dipole moment(dipole)6.375
Total solvent accessible surface area (SASA)934.257
Hydrophobic component of SASA (FOSA)517.558
Hydrophilic component of SASA (FISA)148.474
Pie component of the SASA (PISA)268.224
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1868.56
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)11.15
Free energy of solvation of dipole (dip^2/V)0.0217522
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0119346
Globularity descriptor (glob)0.785303
Predicted polarizability in cubic angstroms (QPpolrz)62.198
Predicted hexadecane/gas partition coefficient (QPlogPC16)18.65
Predicted octanol/gas partition coefficient (QPlogPoct)28.633
Predicted water/gas partition coefficient (QPlogPw)14.161
Predicted octanol/water partition coefficient (QPlogPo/w)5.572
Predicted aqueous solubility (QPlogS)-6.595
Conformation-independent predicted aqueous solubility (CIQPlogS)-8.375
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-6.285
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)387.184
Predicted brain/blood partition coefficient (QPlogBB)-1.885
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)177.393
Predicted skin permeability, log Kp (QPlogKp)-1.967
PM3 calculated ionization potential (IP(ev))9.582
PM3 calculated electron affinity (EA(eV))0.912
Number of likely metabolic reactions (#metab)7
Prediction of binding to human serum albumin (QPlogKhsa)0.798
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)79.97
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)141.322
Number of nitrogen and oxygen atoms (#NandO)10
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q05655PRKCDProtein kinase C deltaT44861SwissTargetPrediction

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T44861DI0287Myocardial infarction[ICD-11: BA41-BA43]Q05655PRKCD

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