Gossypetin 8-glucuronide 3-sulfate



Compound IDCDAMM02743
Common nameGossypetin 8-glucuronide 3-sulfate
IUPAC name6-[2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-3-sulfooxychromen-8-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid
Molecular formulaC21H18O17S

Experimental data

Retention time23.28
Adduct[M+H]+
Actual mz575.036
Theoretical mz575.033
Error4.22
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.1964

Identifiers and class information

Inchi keyHUZYIABAGFALTN-UHFFFAOYNA-N
SmilesO=C(O)C1OC(OC2=C(O)C=C(O)C=3C(=O)C(OS(=O)(=O)O)=C(OC23)C=4C=CC(O)=C(O)C4)C(O)C(O)C1O
SuperclassPhenylpropanoids and polyketides
ClassFlavonoids

Pharmacokinetic properties

Number of descriptor values(#stars)5
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)2
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)13
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)574.423
Computed dipole moment(dipole)7.106
Total solvent accessible surface area (SASA)696.72
Hydrophobic component of SASA (FOSA)55.635
Hydrophilic component of SASA (FISA)505.818
Pie component of the SASA (PISA)133.46
Weakly polar component of the SASA (WPSA)1.807
Total solvent accesible volume (volume)1345.02
Number of hydrogen bond donors (donorHB)7
Number of hydrogen bond acceptors (accptHB)17.55
Free energy of solvation of dipole (dip^2/V)0.0375411
Index of cohesive interaction in solids (ACxDN^.5/SA)0.066645
Globularity descriptor (glob)0.845782
Predicted polarizability in cubic angstroms (QPpolrz)40.601
Predicted hexadecane/gas partition coefficient (QPlogPC16)16.775
Predicted octanol/gas partition coefficient (QPlogPoct)35.114
Predicted water/gas partition coefficient (QPlogPw)30.416
Predicted octanol/water partition coefficient (QPlogPo/w)-1.926
Predicted aqueous solubility (QPlogS)-1.973
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.667
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-1.049
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)0.01
Predicted brain/blood partition coefficient (QPlogBB)-4.93
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)0.003
Predicted skin permeability, log Kp (QPlogKp)-9.123
PM3 calculated ionization potential (IP(ev))8.585
PM3 calculated electron affinity (EA(eV))0.884
Number of likely metabolic reactions (#metab)8
Prediction of binding to human serum albumin (QPlogKhsa)-1.449
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)0
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)308.088
Number of nitrogen and oxygen atoms (#NandO)17
Number of violations of Lipinski’s rule of five (RuleOfFive)3
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P43166CA7Carbonic anhydrase VIIT37541SEA
P22748CA4Carbonic anhydrase IVT53378SEA
P15121AKR1B1Aldose reductaseT26623SEA
P09917ALOX5Arachidonate 5-lipoxygenaseT00140SEA
P60568IL2Interleukin-2T61698SEA
Q9NPH5NOX4NADPH oxidase 4T29741SEA
Q9GZQ4NMUR2Neuromedin-U receptor 2T04210SEA
P47989XDHXanthine dehydrogenaseT40954SEA
Q9HC98NEK6Serine/threonine-protein kinase NEK6T78992SEA
Q9NZ08ERAP1Endoplasmic reticulum aminopeptidase 1T72849SEA
Q15717ELAVL1ELAV-like protein 1T78349SEA
P30837ALDH1B1Acetaldehyde dehydrogenaseT99641SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T53378DI0046Bacterial infection[ICD-11: 1A00-1C4Z]P22748CA4
T53378DI0166Glaucoma[ICD-11: 9C61]P22748CA4
T53378DI0372Seborrhoeic dermatitis[ICD-11: EA81]P22748CA4
T26623DI0298Neuropathy[ICD-11: 8C0Z]P15121AKR1B1
T26623DI0366Rheumatoid arthritis[ICD-11: FA20]P15121AKR1B1
T00140DI0037Asthma[ICD-11: CA23]P09917ALOX5
T00140DI0147Filariasis[ICD-11: 1F66]P09917ALOX5
T00140DI0403Thrombocytopenia[ICD-11: 3B64]P09917ALOX5
T61698DI0275Multiple sclerosis[ICD-11: 8A40]P60568IL2
T61698DI0361Renal cell carcinoma[ICD-11: 2C90]P60568IL2
T29741DI0146Fibrosis[ICD-11: GA14-GC01]Q9NPH5NOX4
T40954DI0206Inborn purine/pyrimidine/nucleotide metabolism error[ICD-11: 5C55]P47989XDH
T40954DI0266Mineral deficiency[ICD-11: 5B5K]P47989XDH
T99641DI0396Substance abuse[ICD-11: 6C40]P30837ALDH1B1

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