Piperphilippinin IV



Compound IDCDAMM02726
Common namePiperphilippinin IV
IUPAC name4-(1,3-benzodioxol-5-ylmethyl)-3-[(3,4-dihydroxyphenyl)methylidene]oxolan-2-one
Molecular formulaC19H16O6

Experimental data

Retention time10.15
Adduct[M+H]+
Actual mz341.105
Theoretical mz341.102
Error6.81
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.929

Identifiers and class information

Inchi keyGWOSVBIYCRFNFK-USSUKOEXNA-N
SmilesO=C1OCC(C1=CC2=CC=C(O)C(O)=C2)CC3=CC=C4OCOC4=C3
SuperclassLignans, neolignans and related compounds
ClassFuranoid lignans

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)6
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)340.332
Computed dipole moment(dipole)5.694
Total solvent accessible surface area (SASA)524.705
Hydrophobic component of SASA (FOSA)181.013
Hydrophilic component of SASA (FISA)145.755
Pie component of the SASA (PISA)197.937
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)963.564
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)6
Free energy of solvation of dipole (dip^2/V)0.033642
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0161715
Globularity descriptor (glob)0.899159
Predicted polarizability in cubic angstroms (QPpolrz)30.446
Predicted hexadecane/gas partition coefficient (QPlogPC16)10.244
Predicted octanol/gas partition coefficient (QPlogPoct)16.573
Predicted water/gas partition coefficient (QPlogPw)10.835
Predicted octanol/water partition coefficient (QPlogPo/w)2
Predicted aqueous solubility (QPlogS)-2.855
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.722
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.108
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)410.869
Predicted brain/blood partition coefficient (QPlogBB)-1
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)189.151
Predicted skin permeability, log Kp (QPlogKp)-2.932
PM3 calculated ionization potential (IP(ev))8.775
PM3 calculated electron affinity (EA(eV))0.61
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)-0.113
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)85.436
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)100.213
Number of nitrogen and oxygen atoms (#NandO)6
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P27338MAOBMonoamine oxidase BT83011SEA
Q15078CDK5R1Cyclin-dependent kinase 5/CDK5 activator 1T09513SEA
Q00535CDK5Cyclin-dependent kinase 5/CDK5 activator 1T20973SEA
P17936IGFBP3Insulin-like growth factor binding protein 3T33455SEA
P01130LDLRLDL receptorT94692SEA
Q92630DYRK2Dual-specificity tyrosine-phosphorylation regulated kinase 2T39486SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T83011DI0115Dementia[ICD-11: 6D80-6D8Z]P27338MAOB
T83011DI0117Depression[ICD-11: 6A70-6A7Z]P27338MAOB
T83011DI0190Hypertension[ICD-11: BA00-BA04]P27338MAOB
T83011DI0243Malaria[ICD-11: 1F40-1F45]P27338MAOB
T83011DI0264Migraine[ICD-11: 8A80]P27338MAOB
T83011DI0331Parkinsonism[ICD-11: 8A00]P27338MAOB
T20973DI0308Obesity[ICD-11: 5B80-5B81]Q00535CDK5
T33455DI0115Dementia[ICD-11: 6D80-6D8Z]P17936IGFBP3
T94692DI0238Lung cancer[ICD-11: 2C25]P01130LDLR

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