23-Hydroxytubocapsanolide A



Compound IDCDAMM02723
Common name23-Hydroxytubocapsanolide A
IUPAC name6-hydroxy-16-[1-(3-hydroxy-4,5-dimethyl-6-oxo-2,3-dihydropyran-2-yl)ethyl]-2,17-dimethyl-8,15-dioxahexacyclo[9.8.0.02,7.07,9.012,17.014,16]nonadec-4-en-3-one
Molecular formulaC28H36O7

Experimental data

Retention time12.89
Adduct[M+H]+
Actual mz485.26
Theoretical mz485.253
Error14.89
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.3416

Identifiers and class information

Inchi keyZTDAKBMARSMGBP-WRWTYTCNNA-N
SmilesO=C1OC(C(O)C(=C1C)C)C(C)C23OC3CC4C5CC6OC76C(O)C=CC(=O)C7(C)C5CCC42C
SuperclassLipids and lipid-like molecules
ClassSteroids and steroid derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)4
Number of reactive functional groups (#rtvFG)3
Predicted central nervous system activity (CNS)-1
Molecular weight (mol_MW)484.588
Computed dipole moment(dipole)11.004
Total solvent accessible surface area (SASA)693.391
Hydrophobic component of SASA (FOSA)475.905
Hydrophilic component of SASA (FISA)142.442
Pie component of the SASA (PISA)75.045
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1382.37
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)12.4
Free energy of solvation of dipole (dip^2/V)0.0875931
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0252906
Globularity descriptor (glob)0.865506
Predicted polarizability in cubic angstroms (QPpolrz)47.317
Predicted hexadecane/gas partition coefficient (QPlogPC16)12.964
Predicted octanol/gas partition coefficient (QPlogPoct)26.592
Predicted water/gas partition coefficient (QPlogPw)17.128
Predicted octanol/water partition coefficient (QPlogPo/w)1.899
Predicted aqueous solubility (QPlogS)-3.938
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.191
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.066
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)441.699
Predicted brain/blood partition coefficient (QPlogBB)-0.945
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)204.538
Predicted skin permeability, log Kp (QPlogKp)-3.496
PM3 calculated ionization potential (IP(ev))10.389
PM3 calculated electron affinity (EA(eV))0.544
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)-0.128
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)85.407
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)119.495
Number of nitrogen and oxygen atoms (#NandO)7
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

Copyright © 2025