Sublanceoside B1



Compound IDCDAMM02722
Common nameSublanceoside B1
IUPAC name7-[5-(4,5-dihydroxy-6-methyloxan-2-yl)oxy-4-methoxy-6-methyloxan-2-yl]oxy-6-hydroxy-4b-methyl-2-(2-methylfuran-3-yl)-2,3,4,4a,5,6,7,8,10,10a-decahydrophenanthren-1-one
Molecular formulaC33H48O10

Experimental data

Retention time23.91
Adduct[M+H]+
Actual mz605.332
Theoretical mz605.332
Error0.29
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.7178

Identifiers and class information

Inchi keyWYKVAXAIOADQLO-OVCNURMBNA-N
SmilesO=C1C(C=2C=COC2C)CCC3C1CC=C4CC(OC5OC(C)C(OC6OC(C)C(O)C(O)C6)C(OC)C5)C(O)CC43C
SuperclassBenzenoids
ClassPhenanthrenes and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)8
Number of reactive functional groups (#rtvFG)3
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)604.736
Computed dipole moment(dipole)6.47
Total solvent accessible surface area (SASA)878.187
Hydrophobic component of SASA (FOSA)636.119
Hydrophilic component of SASA (FISA)137.716
Pie component of the SASA (PISA)104.352
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1755.11
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)16.1
Free energy of solvation of dipole (dip^2/V)0.0238526
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0317541
Globularity descriptor (glob)0.801273
Predicted polarizability in cubic angstroms (QPpolrz)59.945
Predicted hexadecane/gas partition coefficient (QPlogPC16)16.77
Predicted octanol/gas partition coefficient (QPlogPoct)33.368
Predicted water/gas partition coefficient (QPlogPw)21.967
Predicted octanol/water partition coefficient (QPlogPo/w)2.583
Predicted aqueous solubility (QPlogS)-5.096
Conformation-independent predicted aqueous solubility (CIQPlogS)-5.459
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.245
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)489.706
Predicted brain/blood partition coefficient (QPlogBB)-1.349
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)228.669
Predicted skin permeability, log Kp (QPlogKp)-2.922
PM3 calculated ionization potential (IP(ev))9.032
PM3 calculated electron affinity (EA(eV))-0.483
Number of likely metabolic reactions (#metab)9
Prediction of binding to human serum albumin (QPlogKhsa)-0.11
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)77.254
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)129.366
Number of nitrogen and oxygen atoms (#NandO)10
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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