4,5-Dihydrovomifoliol



Compound IDCDAMM02693
Common name4,5-Dihydrovomifoliol
IUPAC name4-hydroxy-4-(3-hydroxybut-1-enyl)-3,3,5-trimethylcyclohexan-1-one
Molecular formulaC13H22O3

Experimental data

Retention time4.7
Adduct[2M+Na]+
Actual mz475.297
Theoretical mz475.303
Error13.92
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.5595

Identifiers and class information

Inchi keyIHDJYDVWNNFPHR-AATRIKPKNA-N
SmilesO=C1CC(C)C(O)(C=CC(O)C)C(C)(C)C1
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)4
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)226.315
Computed dipole moment(dipole)1.926
Total solvent accessible surface area (SASA)469.645
Hydrophobic component of SASA (FOSA)348.432
Hydrophilic component of SASA (FISA)118.71
Pie component of the SASA (PISA)2.503
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)819.812
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)4.45
Free energy of solvation of dipole (dip^2/V)0.0045268
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0134
Globularity descriptor (glob)0.901996
Predicted polarizability in cubic angstroms (QPpolrz)24.11
Predicted hexadecane/gas partition coefficient (QPlogPC16)7.334
Predicted octanol/gas partition coefficient (QPlogPoct)12.698
Predicted water/gas partition coefficient (QPlogPw)8.104
Predicted octanol/water partition coefficient (QPlogPo/w)1.652
Predicted aqueous solubility (QPlogS)-2.672
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.121
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.13
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)741.612
Predicted brain/blood partition coefficient (QPlogBB)-0.65
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)358.118
Predicted skin permeability, log Kp (QPlogKp)-3.314
PM3 calculated ionization potential (IP(ev))10.066
PM3 calculated electron affinity (EA(eV))-0.583
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)-0.151
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)87.991
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)66.396
Number of nitrogen and oxygen atoms (#NandO)3
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P11511CYP19A1Cytochrome P450 19A1T13260SwissTargetPrediction

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T13260DI0062Breast cancer[ICD-11: 2C60-2C6Y]P11511CYP19A1
T13260DI0108Cushing syndrome[ICD-11: 5A70]P11511CYP19A1

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