Antibiotic SB 202742



Compound IDCDAMM02535
Common nameAntibiotic SB 202742
IUPAC name2-heptadeca-8,11,14-trienyl-6-hydroxybenzoic acid
Molecular formulaC24H34O3

Experimental data

Retention time11.69
Adduct[M+H]+
Actual mz371.256
Theoretical mz371.258
Error5.32
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.7088

Identifiers and class information

Inchi keyMBYMHCHZLAJVRK-YSFKBSJESA-N
SmilesO=C(O)C=1C(O)=CC=CC1CCCCCCCC=CCC=CCC=CCC
SuperclassBenzenoids
ClassBenzene and substituted derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)5
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)1
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)15
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)370.531
Computed dipole moment(dipole)7.345
Total solvent accessible surface area (SASA)840.532
Hydrophobic component of SASA (FOSA)539.427
Hydrophilic component of SASA (FISA)134.14
Pie component of the SASA (PISA)166.965
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1447.4
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)1.75
Free energy of solvation of dipole (dip^2/V)0.0372748
Index of cohesive interaction in solids (ACxDN^.5/SA)0.002082
Globularity descriptor (glob)0.736214
Predicted polarizability in cubic angstroms (QPpolrz)43.734
Predicted hexadecane/gas partition coefficient (QPlogPC16)14.469
Predicted octanol/gas partition coefficient (QPlogPoct)16.594
Predicted water/gas partition coefficient (QPlogPw)3.67
Predicted octanol/water partition coefficient (QPlogPo/w)7.461
Predicted aqueous solubility (QPlogS)-8.593
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.399
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.789
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)134.106
Predicted brain/blood partition coefficient (QPlogBB)-1.99
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)71.724
Predicted skin permeability, log Kp (QPlogKp)-1.963
PM3 calculated ionization potential (IP(ev))9.546
PM3 calculated electron affinity (EA(eV))0.311
Number of likely metabolic reactions (#metab)6
Prediction of binding to human serum albumin (QPlogKhsa)1.459
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)95.75
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)67.237
Number of nitrogen and oxygen atoms (#NandO)3
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P21554CNR1Cannabinoid receptor 1 (by homology)T76685SEA
O00519FAAHAnandamide amidohydrolaseT11754SEA
Q15722LTB4RLeukotriene B4 receptor 1T59626SEA
Q99685MGLLMonoglyceride lipaseT18664SEA
Q09472EP300Histone acetyltransferase p300T25956SEA
Q8TDS5OXER1Oxoeicosanoid receptor 1T68834SEA
P10826RARBRetinoic acid receptor betaT61657SEA
Q9UP65PLA2G4CCytosolic phospholipase A2 gammaT91113SEA
Q04609FOLH1Glutamate carboxypeptidase IIT97071SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T76685DI0031Anorexia nervosa[ICD-11: 6B80]P21554CNR1
T76685DI0214Insomnia[ICD-11: 7A00-7A0Z]P21554CNR1
T76685DI0308Obesity[ICD-11: 5B80-5B81]P21554CNR1
T11754DI0101Corneal disease[ICD-11: 9A76-9A78]O00519FAAH
T59626DI0184Human immunodeficiency virus disease[ICD-11: 1C60-1C62]Q15722LTB4R
T59626DI0355Pulmonary disease[ICD-11: 1B10-1F85]Q15722LTB4R
T59626DI0361Renal cell carcinoma[ICD-11: 2C90]Q15722LTB4R
T18664DI0163General pain disorder[ICD-11: 8E43]Q99685MGLL
T18664DI0409Tic disorder[ICD-11: 8A05]Q99685MGLL
T25956DI0346Prostate cancer[ICD-11: 2C82]Q09472EP300
T25956DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]Q09472EP300
T61657DI0225Kaposi sarcoma[ICD-11: 2B57]P10826RARB
T97071DI0122Diagnostic imaging[ICD-11: N.A.]Q04609FOLH1
T97071DI0346Prostate cancer[ICD-11: 2C82]Q04609FOLH1

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