Lindenanolide G



Compound IDCDAMM02462
Common nameLindenanolide G
IUPAC namemethyl 2-[7-hydroxy-5-(hydroxymethyl)-1,5-dimethyl-9-oxo-10-oxatricyclo[4.4.0.02,4]decan-8-ylidene]propanoate
Molecular formulaC16H22O6

Experimental data

Retention time14.68
Adduct[M+H]+
Actual mz311.148
Theoretical mz311.149
Error2.49
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.5737

Identifiers and class information

Inchi keyXZJWQSHQHLHWSV-JVUSBVETNA-N
SmilesO=C(OC)C(=C1C(=O)OC2(C)C3CC3C(C)(CO)C2C1O)C
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)5
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-1
Molecular weight (mol_MW)310.346
Computed dipole moment(dipole)7.098
Total solvent accessible surface area (SASA)537.244
Hydrophobic component of SASA (FOSA)398.49
Hydrophilic component of SASA (FISA)135.891
Pie component of the SASA (PISA)2.863
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)972.686
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)8.4
Free energy of solvation of dipole (dip^2/V)0.0517987
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0221117
Globularity descriptor (glob)0.883708
Predicted polarizability in cubic angstroms (QPpolrz)29.59
Predicted hexadecane/gas partition coefficient (QPlogPC16)8.808
Predicted octanol/gas partition coefficient (QPlogPoct)17.444
Predicted water/gas partition coefficient (QPlogPw)12.056
Predicted octanol/water partition coefficient (QPlogPo/w)0.994
Predicted aqueous solubility (QPlogS)-2.593
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.261
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.427
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)509.623
Predicted brain/blood partition coefficient (QPlogBB)-0.898
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)238.738
Predicted skin permeability, log Kp (QPlogKp)-3.534
PM3 calculated ionization potential (IP(ev))10.47
PM3 calculated electron affinity (EA(eV))0.65
Number of likely metabolic reactions (#metab)3
Prediction of binding to human serum albumin (QPlogKhsa)-0.428
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)81.221
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)103.654
Number of nitrogen and oxygen atoms (#NandO)6
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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