Karaviloside IV



Compound IDCDAMM02437
Common nameKaraviloside IV
IUPAC name2-[5-hydroxy-6-(3-hydroxy-7-methoxy-4,4,9,13,14-pentamethyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl)-2-methylhept-2-en-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
Molecular formulaC37H62O9

Experimental data

Retention time14.13
Adduct[M+H]+
Actual mz651.447
Theoretical mz651.446
Error1.11
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.1089

Identifiers and class information

Inchi keyFHEJVLFYFWDFDA-OBOGRKDNNA-N
SmilesOCC1OC(OC(C=C(C)C)C(O)C(C)C2CCC3(C)C4C(OC)C=C5C(CCC(O)C5(C)C)C4(C)CCC23C)C(O)C(O)C1O
SuperclassLipids and lipid-like molecules
ClassSteroids and steroid derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)4
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)14
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)650.891
Computed dipole moment(dipole)9.802
Total solvent accessible surface area (SASA)984.693
Hydrophobic component of SASA (FOSA)770.199
Hydrophilic component of SASA (FISA)206.586
Pie component of the SASA (PISA)7.907
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1989.65
Number of hydrogen bond donors (donorHB)6
Number of hydrogen bond acceptors (accptHB)15.3
Free energy of solvation of dipole (dip^2/V)0.0482852
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0380598
Globularity descriptor (glob)0.776931
Predicted polarizability in cubic angstroms (QPpolrz)64.558
Predicted hexadecane/gas partition coefficient (QPlogPC16)19.474
Predicted octanol/gas partition coefficient (QPlogPoct)39.21
Predicted water/gas partition coefficient (QPlogPw)24.318
Predicted octanol/water partition coefficient (QPlogPo/w)3.293
Predicted aqueous solubility (QPlogS)-5.982
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.058
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.179
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)108.853
Predicted brain/blood partition coefficient (QPlogBB)-2.562
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)45.008
Predicted skin permeability, log Kp (QPlogKp)-3.955
PM3 calculated ionization potential (IP(ev))9.445
PM3 calculated electron affinity (EA(eV))-0.552
Number of likely metabolic reactions (#metab)11
Prediction of binding to human serum albumin (QPlogKhsa)0.249
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)56.765
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)140.845
Number of nitrogen and oxygen atoms (#NandO)9
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P14679TYRTyrosinaseT97035SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T97035DI0007Acquired hypermelanosis[ICD-11: ED60]P14679TYR
T97035DI0008Acquired hypomelanotic disorder[ICD-11: ED63]P14679TYR

Copyright © 2025