(-)-Triptofordin C 1



Compound IDCDAMM02409
Common name(-)-Triptofordin C 1
IUPAC name(5,12-diacetyloxy-7-benzoyloxy-2-hydroxy-2,6,10,10-tetramethyl-4-oxo-11-oxatricyclo[7.2.1.01,6]dodecan-8-yl) benzoate
Molecular formulaC33H36O11

Experimental data

Retention time0.38
Adduct[2M+K]+
Actual mz1255.41
Theoretical mz1255.42
Error0.92
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.445

Identifiers and class information

Inchi keyNYRHSWLZSNQMFY-UHFFFAOYNA-N
SmilesO=C(OC1C(OC(=O)C=2C=CC=CC2)C3(C)C(OC(=O)C)C(=O)CC(O)(C)C43OC(C)(C)C1C4OC(=O)C)C=5C=CC=CC5
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)7
Number of reactive functional groups (#rtvFG)5
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)608.641
Computed dipole moment(dipole)4.021
Total solvent accessible surface area (SASA)842.296
Hydrophobic component of SASA (FOSA)352.688
Hydrophilic component of SASA (FISA)153.26
Pie component of the SASA (PISA)336.348
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1705.31
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)11.5
Free energy of solvation of dipole (dip^2/V)0.0094798
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0136532
Globularity descriptor (glob)0.81954
Predicted polarizability in cubic angstroms (QPpolrz)60.81
Predicted hexadecane/gas partition coefficient (QPlogPC16)17.516
Predicted octanol/gas partition coefficient (QPlogPoct)28.64
Predicted water/gas partition coefficient (QPlogPw)16.324
Predicted octanol/water partition coefficient (QPlogPo/w)4.459
Predicted aqueous solubility (QPlogS)-5.981
Conformation-independent predicted aqueous solubility (CIQPlogS)-7.713
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-6.056
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)348.766
Predicted brain/blood partition coefficient (QPlogBB)-1.38
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)158.447
Predicted skin permeability, log Kp (QPlogKp)-2.487
PM3 calculated ionization potential (IP(ev))9.88
PM3 calculated electron affinity (EA(eV))0.507
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)0.603
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)72.643
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)172.409
Number of nitrogen and oxygen atoms (#NandO)11
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P08183ABCB1P-glycoprotein 1T25258SwissTargetPrediction and SEA
Q08828ADCY1Brain adenylate cyclase 1T63609SEA
P09382LGALS1Galectin-1T09544SEA
P51843NR0B1Orphan nuclear receptor DAX-1T23191SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T25258DI0238Lung cancer[ICD-11: 2C25]P08183ABCB1
T63609DI0306Nutritional deficiency[ICD-11: 5B50-5B71]Q08828ADCY1

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