Slaframine



Compound IDCDAMM02398
Common nameSlaframine
IUPAC name(6-amino-1,2,3,5,6,7,8,8a-octahydroindolizin-1-yl) acetate
Molecular formulaC10H18N2O2

Experimental data

Retention time8.54
Adduct[M+Na]+
Actual mz221.127
Theoretical mz221.126
Error3.08
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.9765

Identifiers and class information

Inchi keyYYIUHLPAZILPSG-XDTORHTBNA-N
SmilesO=C(OC1CCN2CC(N)CCC21)C
SuperclassOrganoheterocyclic compounds
ClassIndolizidines

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)2
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)2
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)1
Molecular weight (mol_MW)198.264
Computed dipole moment(dipole)4.233
Total solvent accessible surface area (SASA)441.813
Hydrophobic component of SASA (FOSA)344.118
Hydrophilic component of SASA (FISA)97.694
Pie component of the SASA (PISA)0
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)732.727
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)5
Free energy of solvation of dipole (dip^2/V)0.0244503
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0160047
Globularity descriptor (glob)0.889655
Predicted polarizability in cubic angstroms (QPpolrz)21.886
Predicted hexadecane/gas partition coefficient (QPlogPC16)6.214
Predicted octanol/gas partition coefficient (QPlogPoct)12.398
Predicted water/gas partition coefficient (QPlogPw)8.86
Predicted octanol/water partition coefficient (QPlogPo/w)0.02
Predicted aqueous solubility (QPlogS)-0.004
Conformation-independent predicted aqueous solubility (CIQPlogS)0.648
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.77
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)72.99
Predicted brain/blood partition coefficient (QPlogBB)0.417
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)35.763
Predicted skin permeability, log Kp (QPlogKp)-7.253
PM3 calculated ionization potential (IP(ev))8.806
PM3 calculated electron affinity (EA(eV))-1.131
Number of likely metabolic reactions (#metab)1
Prediction of binding to human serum albumin (QPlogKhsa)-0.353
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)60.414
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)66.077
Number of nitrogen and oxygen atoms (#NandO)4
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P11229CHRM1Muscarinic acetylcholine receptor M1T28893SwissTargetPrediction

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T28893DI0001Abdominal pelvic pain[ICD-11: MD81]P11229CHRM1
T28893DI0086Chronic obstructive pulmonary disease[ICD-11: CA22]P11229CHRM1
T28893DI0101Corneal disease[ICD-11: 9A76-9A78]P11229CHRM1
T28893DI0129Dystonic disorder[ICD-11: 8A02]P11229CHRM1
T28893DI0154Functional bladder disorder[ICD-11: GC50]P11229CHRM1
T28893DI0157Gastric ulcer[ICD-11: DA60]P11229CHRM1
T28893DI0166Glaucoma[ICD-11: 9C61]P11229CHRM1
T28893DI0186Hyperhidrosis[ICD-11: EE00]P11229CHRM1
T28893DI0218Irritable bowel syndrome[ICD-11: DD91]P11229CHRM1
T28893DI0331Parkinsonism[ICD-11: 8A00]P11229CHRM1
T28893DI0333Peptic ulcer[ICD-11: DA61]P11229CHRM1
T28893DI0371Sebaceous gland disorder[ICD-11: ED91]P11229CHRM1

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