C-curarine



Compound IDCDAMM02391
Common nameC-curarine
IUPAC name(1R,9R,11R,13S,15S,16S,19R,29S,30E,32S,35S,38E)-30,38-di(ethylidene)-16,32-dimethyl-10-oxa-8,26-diaza-16,32-diazoniadodecacyclo[27.5.2.213,16.18,12.01,9.02,7.09,28.011,19.011,26.015,19.020,25.032,35]nonatriaconta-2,4,6,12(39),20,22,24,27-octaene
Molecular formulaC40H44N4O

Experimental data

Retention time4.5
Adduct[M+H]+
Actual mz597.359
Theoretical mz597.359
Error0.46
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.1921

Identifiers and class information

Inchi keyDWELRYDMYVJVSL-ZDAJIBGCNA-N
SmilesO1C23C4=CN5C=6C=CC=CC6C78CC[N+]9(C)CC(=CC)C(C(=CN3C=%10C=CC=CC%10C%112CC[N+]%12(C)CC(=CC)C4CC%11%12)C157)CC89
SuperclassAlkaloids and derivatives
ClassStrychnos alkaloids

Pharmacokinetic properties

Number of descriptor values(#stars)6
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)0
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)2
Molecular weight (mol_MW)596.814
Computed dipole moment(dipole)8.559
Total solvent accessible surface area (SASA)847.504
Hydrophobic component of SASA (FOSA)550.125
Hydrophilic component of SASA (FISA)0
Pie component of the SASA (PISA)297.379
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1716.25
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)0.75
Free energy of solvation of dipole (dip^2/V)0.0426875
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.817981
Predicted polarizability in cubic angstroms (QPpolrz)65.37
Predicted hexadecane/gas partition coefficient (QPlogPC16)16.034
Predicted octanol/gas partition coefficient (QPlogPoct)22.843
Predicted water/gas partition coefficient (QPlogPw)4.521
Predicted octanol/water partition coefficient (QPlogPo/w)8.54
Predicted aqueous solubility (QPlogS)-15.035
Conformation-independent predicted aqueous solubility (CIQPlogS)-15.035
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.895
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)9906.04
Predicted brain/blood partition coefficient (QPlogBB)0.951
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)5899.29
Predicted skin permeability, log Kp (QPlogKp)-0.472
PM3 calculated ionization potential (IP(ev))2.698
PM3 calculated electron affinity (EA(eV))0.986
Number of likely metabolic reactions (#metab)8
Prediction of binding to human serum albumin (QPlogKhsa)3.4
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)9.279
Number of nitrogen and oxygen atoms (#NandO)5
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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