1-Phenyl-2,4-pentadiyn-1-one



Compound IDCDAMM02377
Common name1-Phenyl-2,4-pentadiyn-1-one
IUPAC name1-phenylpenta-2,4-diyn-1-one
Molecular formulaC11H6O

Experimental data

Retention time10.43
Adduct[M+H]+
Actual mz155.049
Theoretical mz155.049
Error0.8
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.655

Identifiers and class information

Inchi keyZKQQJUBGJLUJNT-UHFFFAOYSA-N
SmilesO=C(C#CC#C)C=1C=CC=CC1
SuperclassBenzenoids
ClassBenzene and substituted derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)2
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)154.168
Computed dipole moment(dipole)4.307
Total solvent accessible surface area (SASA)398.601
Hydrophobic component of SASA (FOSA)36.322
Hydrophilic component of SASA (FISA)58.701
Pie component of the SASA (PISA)303.578
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)610.549
Number of hydrogen bond donors (donorHB)0.5
Number of hydrogen bond acceptors (accptHB)2
Free energy of solvation of dipole (dip^2/V)0.03038
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0035479
Globularity descriptor (glob)0.873186
Predicted polarizability in cubic angstroms (QPpolrz)19.895
Predicted hexadecane/gas partition coefficient (QPlogPC16)6.31
Predicted octanol/gas partition coefficient (QPlogPoct)8.232
Predicted water/gas partition coefficient (QPlogPw)5.404
Predicted octanol/water partition coefficient (QPlogPo/w)2.211
Predicted aqueous solubility (QPlogS)-2.668
Conformation-independent predicted aqueous solubility (CIQPlogS)-1.901
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.032
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2749.39
Predicted brain/blood partition coefficient (QPlogBB)-0.07
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1476.09
Predicted skin permeability, log Kp (QPlogKp)-1.34
PM3 calculated ionization potential (IP(ev))10.141
PM3 calculated electron affinity (EA(eV))0.774
Number of likely metabolic reactions (#metab)0
Prediction of binding to human serum albumin (QPlogKhsa)-0.168
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)30.873
Number of nitrogen and oxygen atoms (#NandO)1
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q4U2R8SLC22A6Solute carrier family 22 member 6 (by homology)T70680SEA
P23141CES1Acyl coenzyme A:cholesterol acyltransferaseT76369SEA
Q9Y4C1KDM3ALysine-specific demethylase 3AT25362SEA
Q99685MGLLMonoglyceride lipaseT18664SwissTargetPrediction
Q9NPC2KCNK9Potassium channel subfamily K member 9T57613SEA
Q03405PLAURUrokinase plasminogen activator surface receptorT74363SEA
Q9UJM8HAO1Hydroxyacid oxidase 1T63170SEA
O43175PHGDHPhosphoglycerate dehydrogenaseT15139SEA
Q4U2R8SLC22A6Solute carrier family 22 member 6 (by homology)T70680SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T70680DI0167Gout[ICD-11: FA25]Q4U2R8SLC22A6
T70680DI0206Inborn purine/pyrimidine/nucleotide metabolism error[ICD-11: 5C55]Q4U2R8SLC22A6
T70680DI0310Ocular disease[ICD-11: N.A.]Q4U2R8SLC22A6
T76369DI0335Peroxisomal disease[ICD-11: 5C57]P23141CES1
T76369DI0398Synthesis disorder[ICD-11: 5C52-5C59]P23141CES1
T18664DI0163General pain disorder[ICD-11: 8E43]Q99685MGLL
T18664DI0409Tic disorder[ICD-11: 8A05]Q99685MGLL
T74363DI0286Myeloproliferative neoplasm[ICD-11: 2A20]Q03405PLAUR
T74363DI0404Thrombocytosis[ICD-11: 3B63]Q03405PLAUR
T63170DI0201Inborn carbohydrate metabolism error[ICD-11: 5C51]Q9UJM8HAO1
T70680DI0167Gout[ICD-11: FA25]Q4U2R8SLC22A6
T70680DI0206Inborn purine/pyrimidine/nucleotide metabolism error[ICD-11: 5C55]Q4U2R8SLC22A6
T70680DI0310Ocular disease[ICD-11: N.A.]Q4U2R8SLC22A6

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