Pregeijerene



Compound IDCDAMM02376
Common namePregeijerene
IUPAC name1,7-dimethylcyclodeca-1,3,7-triene
Molecular formulaC12H18

Experimental data

Retention time9.21
Adduct[2M+K]+
Actual mz363.243
Theoretical mz363.245
Error6.22
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.2638

Identifiers and class information

Inchi keyACTKFDMFHYIKRY-MBDGBGPPSA-N
SmilesC=1C=C(C)CCC=C(C)CCC1
SuperclassHydrocarbons
ClassUnsaturated hydrocarbons

Pharmacokinetic properties

Number of descriptor values(#stars)6
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)0
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)2
Molecular weight (mol_MW)162.274
Computed dipole moment(dipole)0.345
Total solvent accessible surface area (SASA)406.121
Hydrophobic component of SASA (FOSA)370.926
Hydrophilic component of SASA (FISA)0
Pie component of the SASA (PISA)35.195
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)682.24
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)0
Free energy of solvation of dipole (dip^2/V)0.0001746
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.922858
Predicted polarizability in cubic angstroms (QPpolrz)21.485
Predicted hexadecane/gas partition coefficient (QPlogPC16)5.078
Predicted octanol/gas partition coefficient (QPlogPoct)6.026
Predicted water/gas partition coefficient (QPlogPw)-0.268
Predicted octanol/water partition coefficient (QPlogPo/w)4.297
Predicted aqueous solubility (QPlogS)-4.918
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.918
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-2.948
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)9906.04
Predicted brain/blood partition coefficient (QPlogBB)0.935
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)5899.29
Predicted skin permeability, log Kp (QPlogKp)-1.396
PM3 calculated ionization potential (IP(ev))9.222
PM3 calculated electron affinity (EA(eV))-0.709
Number of likely metabolic reactions (#metab)6
Prediction of binding to human serum albumin (QPlogKhsa)0.599
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)0
Number of nitrogen and oxygen atoms (#NandO)0
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q07869PPARAPeroxisome proliferator-activated receptor alphaT86591SwissTargetPrediction
P34972CNR2Cannabinoid receptor 2T37693SwissTargetPrediction
P08151GLI1Zinc finger protein GLI1T40890SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T86591DI0187Hyperlipidemia[ICD-11: 5C80]Q07869PPARA
T86591DI0188Hyper-lipoproteinaemia[ICD-11: 5C80]Q07869PPARA
T86591DI0417Type 2 diabetes mellitus[ICD-11: 5A11]Q07869PPARA
T37693DI0040Attention deficit hyperactivity disorder[ICD-11: 6A05]P34972CNR2
T37693DI0214Insomnia[ICD-11: 7A00-7A0Z]P34972CNR2

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