Sorgoleone 358



Compound IDCDAMM02372
Common nameSorgoleone 358
IUPAC name2-hydroxy-5-methoxy-3-pentadeca-8,11,14-trienylcyclohexa-2,5-diene-1,4-dione
Molecular formulaC22H30O4

Experimental data

Retention time4.16
Adduct[M+H]+
Actual mz359.222
Theoretical mz359.221
Error2.85
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.3282

Identifiers and class information

Inchi keyFGWRUVXUQWGLOX-HHWLVVFRSA-N
SmilesO=C1C=C(OC)C(=O)C(=C1O)CCCCCCCC=CCC=CCC=C
SuperclassOrganic oxygen compounds
ClassOrganooxygen compounds

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)14
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)358.477
Computed dipole moment(dipole)2.223
Total solvent accessible surface area (SASA)794.015
Hydrophobic component of SASA (FOSA)543.867
Hydrophilic component of SASA (FISA)130.438
Pie component of the SASA (PISA)119.711
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1367.64
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)5.5
Free energy of solvation of dipole (dip^2/V)0.0036124
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0069268
Globularity descriptor (glob)0.750441
Predicted polarizability in cubic angstroms (QPpolrz)40.733
Predicted hexadecane/gas partition coefficient (QPlogPC16)13.214
Predicted octanol/gas partition coefficient (QPlogPoct)17.104
Predicted water/gas partition coefficient (QPlogPw)7.125
Predicted octanol/water partition coefficient (QPlogPo/w)4.784
Predicted aqueous solubility (QPlogS)-6.396
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.665
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-6.141
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)574.065
Predicted brain/blood partition coefficient (QPlogBB)-1.824
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)271.528
Predicted skin permeability, log Kp (QPlogKp)-2.158
PM3 calculated ionization potential (IP(ev))9.814
PM3 calculated electron affinity (EA(eV))1.95
Number of likely metabolic reactions (#metab)6
Prediction of binding to human serum albumin (QPlogKhsa)0.638
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)83.228
Number of nitrogen and oxygen atoms (#NandO)4
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P09917ALOX5Arachidonate 5-lipoxygenaseT00140SEA
Q8TDS5OXER1Oxoeicosanoid receptor 1T68834SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T00140DI0037Asthma[ICD-11: CA23]P09917ALOX5
T00140DI0147Filariasis[ICD-11: 1F66]P09917ALOX5
T00140DI0403Thrombocytopenia[ICD-11: 3B64]P09917ALOX5

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