Marindinin



Compound IDCDAMM02347
Common nameMarindinin
IUPAC name4-methoxy-2-(2-phenylethyl)-2,3-dihydropyran-6-one
Molecular formulaC14H16O3

Experimental data

Retention time14.98
Adduct[M+H]+
Actual mz233.117
Theoretical mz233.117
Error3.33
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.0622

Identifiers and class information

Inchi keyVOOYTQRREPYRIW-UHFFFAOYNA-N
SmilesO=C1OC(CC(OC)=C1)CCC=2C=CC=CC2
SuperclassPhenylpropanoids and polyketides
ClassKavalactones

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)4
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)232.279
Computed dipole moment(dipole)6.015
Total solvent accessible surface area (SASA)503.098
Hydrophobic component of SASA (FOSA)210.302
Hydrophilic component of SASA (FISA)69.112
Pie component of the SASA (PISA)223.684
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)834.464
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)3.75
Free energy of solvation of dipole (dip^2/V)0.0433549
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.852022
Predicted polarizability in cubic angstroms (QPpolrz)26.809
Predicted hexadecane/gas partition coefficient (QPlogPC16)7.936
Predicted octanol/gas partition coefficient (QPlogPoct)10.868
Predicted water/gas partition coefficient (QPlogPw)5.733
Predicted octanol/water partition coefficient (QPlogPo/w)2.696
Predicted aqueous solubility (QPlogS)-3.136
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.856
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.993
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2190.31
Predicted brain/blood partition coefficient (QPlogBB)-0.312
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1154.51
Predicted skin permeability, log Kp (QPlogKp)-1.621
PM3 calculated ionization potential (IP(ev))9.607
PM3 calculated electron affinity (EA(eV))0.26
Number of likely metabolic reactions (#metab)2
Prediction of binding to human serum albumin (QPlogKhsa)-0.133
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)47.826
Number of nitrogen and oxygen atoms (#NandO)3
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q99720SIGMAR1Sigma opioid receptorT46360SEA
Q96RJ0TAAR1Trace amine-associated receptor 1 (by homology)T99524SEA
Q05940SLC18A2Synaptic vesicular amine transporter (by homology)T48873SEA
P11511CYP19A1Cytochrome P450 19A1T13260SEA
P48039MTNR1AMelatonin receptor 1AT97613SEA
P49286MTNR1BMelatonin receptor 1BT48268SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T46360DI0105Cough[ICD-11: MD12]Q99720SIGMAR1
T99524DI0040Attention deficit hyperactivity disorder[ICD-11: 6A05]Q96RJ0TAAR1
T99524DI0149Focal/segmental autonomic disorder[ICD-11: 8D8A]Q96RJ0TAAR1
T99524DI0290Narcolepsy[ICD-11: 7A20]Q96RJ0TAAR1
T48873DI0079Choreiform disorder[ICD-11: 8A01]Q05940SLC18A2
T48873DI0125Dissociative neurological symptom disorder[ICD-11: 6B60]Q05940SLC18A2
T48873DI0129Dystonic disorder[ICD-11: 8A02]Q05940SLC18A2
T48873DI0137Essential hypertension[ICD-11: BA00]Q05940SLC18A2
T48873DI0190Hypertension[ICD-11: BA00-BA04]Q05940SLC18A2
T13260DI0062Breast cancer[ICD-11: 2C60-2C6Y]P11511CYP19A1
T13260DI0108Cushing syndrome[ICD-11: 5A70]P11511CYP19A1
T97613DI0214Insomnia[ICD-11: 7A00-7A0Z]P48039MTNR1A
T48268DI0214Insomnia[ICD-11: 7A00-7A0Z]P49286MTNR1B

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