7-Angeloylheliotridine



Compound IDCDAMM02333
Common name7-Angeloylheliotridine
IUPAC name[7-(hydroxymethyl)-2,3,5,8-tetrahydro-1H-pyrrolizin-1-yl] 2-methylbut-2-enoate
Molecular formulaC13H19NO3

Experimental data

Retention time9.43
Adduct[M+H]+
Actual mz238.144
Theoretical mz238.143
Error2.2
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.8922

Identifiers and class information

Inchi keyTYGYPIIOOQNWBU-MCZAIVHYNA-N
SmilesO=C(OC1CCN2CC=C(CO)C21)C(=CC)C
SuperclassAlkaloids and derivatives
Class

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)1
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)4
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)1
Molecular weight (mol_MW)237.298
Computed dipole moment(dipole)5.699
Total solvent accessible surface area (SASA)490.386
Hydrophobic component of SASA (FOSA)373.815
Hydrophilic component of SASA (FISA)68.058
Pie component of the SASA (PISA)48.513
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)844.721
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)5.7
Free energy of solvation of dipole (dip^2/V)0.0384443
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0116235
Globularity descriptor (glob)0.881257
Predicted polarizability in cubic angstroms (QPpolrz)25.547
Predicted hexadecane/gas partition coefficient (QPlogPC16)7.185
Predicted octanol/gas partition coefficient (QPlogPoct)12.661
Predicted water/gas partition coefficient (QPlogPw)7.889
Predicted octanol/water partition coefficient (QPlogPo/w)1.305
Predicted aqueous solubility (QPlogS)-1.415
Conformation-independent predicted aqueous solubility (CIQPlogS)-0.959
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.411
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)558.996
Predicted brain/blood partition coefficient (QPlogBB)0.137
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)291.882
Predicted skin permeability, log Kp (QPlogKp)-4.281
PM3 calculated ionization potential (IP(ev))9.392
PM3 calculated electron affinity (EA(eV))0.007
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)-0.305
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)83.758
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)57.187
Number of nitrogen and oxygen atoms (#NandO)4
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P19838NFKB1Nuclear factor NF-kappa-B p105 subunitT83145SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T83145DI0218Irritable bowel syndrome[ICD-11: DD91]P19838NFKB1
T83145DI0366Rheumatoid arthritis[ICD-11: FA20]P19838NFKB1

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