Oxalacetic acid



Compound IDCDAMM02320
Common nameOxalacetic acid
IUPAC name2-oxobutanedioic acid
Molecular formulaC4H4O5

Experimental data

Retention time15.12
Adduct[M+H]+
Actual mz133.014
Theoretical mz133.013
Error3.94
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.7874

Identifiers and class information

Inchi keyKHPXUQMNIQBQEV-UHFFFAOYSA-N
SmilesO=C(O)C(=O)CC(=O)O
SuperclassOrganic acids and derivatives
ClassKeto acids and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)4
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)2
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)3
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)132.073
Computed dipole moment(dipole)6.261
Total solvent accessible surface area (SASA)291.785
Hydrophobic component of SASA (FOSA)41.509
Hydrophilic component of SASA (FISA)250.276
Pie component of the SASA (PISA)0
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)432.991
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)5
Free energy of solvation of dipole (dip^2/V)0.0905445
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0171359
Globularity descriptor (glob)0.948611
Predicted polarizability in cubic angstroms (QPpolrz)9.248
Predicted hexadecane/gas partition coefficient (QPlogPC16)4.434
Predicted octanol/gas partition coefficient (QPlogPoct)8.248
Predicted water/gas partition coefficient (QPlogPw)7.851
Predicted octanol/water partition coefficient (QPlogPo/w)-0.556
Predicted aqueous solubility (QPlogS)0.049
Conformation-independent predicted aqueous solubility (CIQPlogS)-0.282
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)1.251
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2.69
Predicted brain/blood partition coefficient (QPlogBB)-1.472
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1.334
Predicted skin permeability, log Kp (QPlogKp)-5.844
PM3 calculated ionization potential (IP(ev))11.323
PM3 calculated electron affinity (EA(eV))1.371
Number of likely metabolic reactions (#metab)1
Prediction of binding to human serum albumin (QPlogKhsa)-1.353
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)31.383
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)125.931
Number of nitrogen and oxygen atoms (#NandO)5
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q6B0I6KDM4DLysine-specific demethylase 4DT17036SEA
Q9Y4C1KDM3ALysine-specific demethylase 3AT25362SEA
O15054KDM6BLysine-specific demethylase 6BT56057SEA
P41229KDM5CLysine-specific demethylase 5CT85540SEA
Q9Y2K7KDM2ALysine-specific demethylase 2AT71949SEA
Q9UPP1PHF8Histone lysine demethylase PHF8T00933SEA
Q9UJM8HAO1Hydroxyacid oxidase 1T63170SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T63170DI0201Inborn carbohydrate metabolism error[ICD-11: 5C51]Q9UJM8HAO1

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