Triptohypol B



Compound IDCDAMM02306
Common nameTriptohypol B
IUPAC name11-hydroxy-10-methoxy-2,4a,6a,6a,9,14a-hexamethyl-8-oxo-1,3,4,5,6,13,14,14b-octahydropicene-2-carboxylic acid
Molecular formulaC30H40O5

Experimental data

Retention time4.3
Adduct[M+H]+
Actual mz481.295
Theoretical mz481.295
Error1.2
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.9882

Identifiers and class information

Inchi keyKFGGKCFEQGLWFO-LKRXBVDONA-N
SmilesO=C1C=C2C(C3=CC(O)=C(OC)C(=C13)C)(C)CCC4(C)C5CC(C(=O)O)(C)CCC5(C)CCC24C
SuperclassBenzenoids
ClassPhenanthrenes and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)1
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)3
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)480.643
Computed dipole moment(dipole)7.985
Total solvent accessible surface area (SASA)710.593
Hydrophobic component of SASA (FOSA)511.842
Hydrophilic component of SASA (FISA)160.331
Pie component of the SASA (PISA)38.42
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1405.66
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)5.5
Free energy of solvation of dipole (dip^2/V)0.045362
Index of cohesive interaction in solids (ACxDN^.5/SA)0.010946
Globularity descriptor (glob)0.854013
Predicted polarizability in cubic angstroms (QPpolrz)48.541
Predicted hexadecane/gas partition coefficient (QPlogPC16)13.038
Predicted octanol/gas partition coefficient (QPlogPoct)22.745
Predicted water/gas partition coefficient (QPlogPw)10.466
Predicted octanol/water partition coefficient (QPlogPo/w)5.124
Predicted aqueous solubility (QPlogS)-6.606
Conformation-independent predicted aqueous solubility (CIQPlogS)-7.19
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-2.27
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)75.698
Predicted brain/blood partition coefficient (QPlogBB)-1.083
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)38.655
Predicted skin permeability, log Kp (QPlogKp)-4.051
PM3 calculated ionization potential (IP(ev))9.253
PM3 calculated electron affinity (EA(eV))0.559
Number of likely metabolic reactions (#metab)3
Prediction of binding to human serum albumin (QPlogKhsa)1.044
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)77.621
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)98.093
Number of nitrogen and oxygen atoms (#NandO)5
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q07820MCL1Induced myeloid leukemia cell differentiation protein Mcl-1T14912SwissTargetPrediction
Q96RI1NR1H4Bile acid receptor FXRT51426SwissTargetPrediction
P10275ARAndrogen ReceptorT11211SwissTargetPrediction
P18405SRD5A1Steroid 5-alpha-reductase 1T70309SwissTargetPrediction
Q8TDU6GPBAR1G-protein coupled bile acid receptor 1T86273SwissTargetPrediction
P08254MMP3Matrix metalloproteinase 3T86702SwissTargetPrediction
P03956MMP1Matrix metalloproteinase 1T52450SwissTargetPrediction
Q07817BCL2L1Apoptosis regulator Bcl-XT56510SwissTargetPrediction
O14746TERTTelomerase reverse transcriptaseT86052SEA
P24723PRKCHProtein kinase C etaT40149SwissTargetPrediction
Q06124PTPN11Protein-tyrosine phosphatase 2CT13057SwissTargetPrediction
Q13258PTGDRProstanoid DP receptorT68782SwissTargetPrediction
P00390GSRGlutathione reductaseT30803SwissTargetPrediction
P29317EPHA2Ephrin type-A receptor 2T57278SwissTargetPrediction
Q16548BCL2A1Bcl-2-related protein A1 (by homology)T12797SwissTargetPrediction

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T14912DI0012Acute myeloid leukaemia[ICD-11: 2A60]Q07820MCL1
T14912DI0245Malignant haematopoietic neoplasm[ICD-11: 2B33]Q07820MCL1
T14912DI0250Mature B-cell lymphoma[ICD-11: 2A85]Q07820MCL1
T14912DI0252Melanoma[ICD-11: 2C30]Q07820MCL1
T14912DI0274Multiple myeloma[ICD-11: 2A83]Q07820MCL1
T14912DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]Q07820MCL1
T51426DI0043Autoimmune liver disease[ICD-11: DB96]Q96RI1NR1H4
T51426DI0077Cholelithiasis[ICD-11: DC11]Q96RI1NR1H4
T51426DI0320Osteoarthritis[ICD-11: FA00-FA05]Q96RI1NR1H4
T11211DI0005Acne vulgaris[ICD-11: ED80]P10275AR
T11211DI0012Acute myeloid leukaemia[ICD-11: 2A60]P10275AR
T11211DI0021Alcoholic liver disease[ICD-11: DB94]P10275AR
T11211DI0062Breast cancer[ICD-11: 2C60-2C6Y]P10275AR
T11211DI0086Chronic obstructive pulmonary disease[ICD-11: CA22]P10275AR
T11211DI0145Female pelvic pain[ICD-11: GA34]P10275AR
T11211DI0194Hypo-osmolality/hyponatraemia[ICD-11: 5C72]P10275AR
T11211DI0237Low bone mass disorder[ICD-11: FB83]P10275AR
T11211DI0247Mammary tumour[ICD-11: 2C60-2C6Z]P10275AR
T11211DI0346Prostate cancer[ICD-11: 2C82]P10275AR
T11211DI0401Testicular dysfunction[ICD-11: 5A81]P10275AR
T70309DI0347Prostate disease[ICD-11: GA91]P18405SRD5A1
T86273DI0417Type 2 diabetes mellitus[ICD-11: 5A11]Q8TDU6GPBAR1
T86702DI0101Corneal disease[ICD-11: 9A76-9A78]P08254MMP3
T86702DI0179Hepatitis virus infection[ICD-11: 1E50-1E51]P08254MMP3
T86702DI0199Idiopathic interstitial pneumonitis[ICD-11: CB03]P08254MMP3
T86702DI0275Multiple sclerosis[ICD-11: 8A40]P08254MMP3
T86702DI0287Myocardial infarction[ICD-11: BA41-BA43]P08254MMP3
T86702DI0320Osteoarthritis[ICD-11: FA00-FA05]P08254MMP3
T86702DI0366Rheumatoid arthritis[ICD-11: FA20]P08254MMP3
T52450DI0238Lung cancer[ICD-11: 2C25]P03956MMP1
T56510DI0286Myeloproliferative neoplasm[ICD-11: 2A20]Q07817BCL2L1
T86052DI0184Human immunodeficiency virus disease[ICD-11: 1C60-1C62]O14746TERT
T86052DI0284Myelodysplastic syndrome[ICD-11: 2A37]O14746TERT
T86052DI0326Pancreatic cancer[ICD-11: 2C10]O14746TERT
T40149DI0184Human immunodeficiency virus disease[ICD-11: 1C60-1C62]P24723PRKCH
T13057DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]Q06124PTPN11
T68782DI0102Coronary atherosclerosis[ICD-11: BA52]Q13258PTGDR
T30803DI0062Breast cancer[ICD-11: 2C60-2C6Y]P00390GSR
T57278DI0060Brain cancer[ICD-11: 2A00]P29317EPHA2
T57278DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P29317EPHA2

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