1-(3-Aminopropyl)-4-aminobutanal



Compound IDCDAMM02193
Common name1-(3-Aminopropyl)-4-aminobutanal
IUPAC name4-(3-aminopropylamino)butanal
Molecular formulaC7H16N2O

Experimental data

Retention time5.11
Adduct[M+K]+
Actual mz183.09
Theoretical mz183.089
Error2.96
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.4865

Identifiers and class information

Inchi keyJNZUMEMWAPJNLC-UHFFFAOYSA-N
SmilesO=CCCCNCCCN
SuperclassOrganic oxygen compounds
ClassOrganooxygen compounds

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)2
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)8
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-1
Molecular weight (mol_MW)144.216
Computed dipole moment(dipole)3.839
Total solvent accessible surface area (SASA)417.351
Hydrophobic component of SASA (FOSA)269.327
Hydrophilic component of SASA (FISA)148.025
Pie component of the SASA (PISA)0
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)650.655
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)4.5
Free energy of solvation of dipole (dip^2/V)0.0226453
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0186755
Globularity descriptor (glob)0.870089
Predicted polarizability in cubic angstroms (QPpolrz)14.748
Predicted hexadecane/gas partition coefficient (QPlogPC16)5.781
Predicted octanol/gas partition coefficient (QPlogPoct)11.052
Predicted water/gas partition coefficient (QPlogPw)8.792
Predicted octanol/water partition coefficient (QPlogPo/w)-0.801
Predicted aqueous solubility (QPlogS)1.31
Conformation-independent predicted aqueous solubility (CIQPlogS)1.34
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.086
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)24.321
Predicted brain/blood partition coefficient (QPlogBB)-0.425
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)10.903
Predicted skin permeability, log Kp (QPlogKp)-7.605
PM3 calculated ionization potential (IP(ev))9.477
PM3 calculated electron affinity (EA(eV))-0.638
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)-0.781
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)47.06
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)79.45
Number of nitrogen and oxygen atoms (#NandO)3
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P07327ADH1AAlcohol dehydrogenase alpha chainT65570SEA
P19838NFKB1Nuclear factor NF-kappa-B p105 subunitT83145SEA
Q05586GRIN1Glutamate NMDA receptor; GRIN1/GRIN2BT62276SEA
Q12879GRIN2AGlutamate NMDA receptor; GRIN1/GRIN2AT22285SEA
P23280CA6Carbonic anhydrase VIT06569SEA
P22748CA4Carbonic anhydrase IVT53378SEA
Q6QHF9PAOXPolyamine oxidaseT88699SEA
P42575CASP2Caspase-2T09128SEA
Q13224GRIN2BGlutamate [NMDA] receptor subunit epsilon 2T76414SEA
P40394ADH7Alcohol dehydrogenase class IVT09770SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T65570DI0139Exposure to noxious substances harmful effect[ICD-11: NE61]P07327ADH1A
T83145DI0218Irritable bowel syndrome[ICD-11: DD91]P19838NFKB1
T83145DI0366Rheumatoid arthritis[ICD-11: FA20]P19838NFKB1
T62276DI0046Bacterial infection[ICD-11: 1A00-1C4Z]Q05586GRIN1
T62276DI0182HIV-infected patients with tuberculosis[ICD-11: 1B10-1B14]Q05586GRIN1
T22285DI0306Nutritional deficiency[ICD-11: 5B50-5B71]Q12879GRIN2A
T06569DI0046Bacterial infection[ICD-11: 1A00-1C4Z]P23280CA6
T06569DI0372Seborrhoeic dermatitis[ICD-11: EA81]P23280CA6
T53378DI0046Bacterial infection[ICD-11: 1A00-1C4Z]P22748CA4
T53378DI0166Glaucoma[ICD-11: 9C61]P22748CA4
T53378DI0372Seborrhoeic dermatitis[ICD-11: EA81]P22748CA4
T76414DI0024Alpha-1-antitrypsin deficiency[ICD-11: 5C5A]Q13224GRIN2B

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