Galbanic acid



Compound IDCDAMM02154
Common nameGalbanic acid
IUPAC name3-[2,3-dimethyl-2-[(2-oxochromen-7-yl)oxymethyl]-6-propan-2-ylidenecyclohexyl]propanoic acid
Molecular formulaC24H30O5

Experimental data

Retention time8.18
Adduct[M+H]+
Actual mz399.216
Theoretical mz399.216
Error1.44
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.0253

Identifiers and class information

Inchi keyCVWWNYPTZYQCSE-UHFFFAOYNA-N
SmilesO=C1OC=2C=C(OCC3(C)C(C(=C(C)C)CCC3C)CCC(=O)O)C=CC2C=C1
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)1
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)6
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)398.498
Computed dipole moment(dipole)12.577
Total solvent accessible surface area (SASA)664.217
Hydrophobic component of SASA (FOSA)342.782
Hydrophilic component of SASA (FISA)148.81
Pie component of the SASA (PISA)172.625
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1253.13
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)5.25
Free energy of solvation of dipole (dip^2/V)0.126221
Index of cohesive interaction in solids (ACxDN^.5/SA)0.007904
Globularity descriptor (glob)0.84629
Predicted polarizability in cubic angstroms (QPpolrz)41.792
Predicted hexadecane/gas partition coefficient (QPlogPC16)12.343
Predicted octanol/gas partition coefficient (QPlogPoct)19.863
Predicted water/gas partition coefficient (QPlogPw)8.816
Predicted octanol/water partition coefficient (QPlogPo/w)4.652
Predicted aqueous solubility (QPlogS)-5.467
Conformation-independent predicted aqueous solubility (CIQPlogS)-5.853
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.035
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)97.35
Predicted brain/blood partition coefficient (QPlogBB)-1.183
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)50.734
Predicted skin permeability, log Kp (QPlogKp)-3.078
PM3 calculated ionization potential (IP(ev))9.308
PM3 calculated electron affinity (EA(eV))0.977
Number of likely metabolic reactions (#metab)6
Prediction of binding to human serum albumin (QPlogKhsa)0.594
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)89.774
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)93.485
Number of nitrogen and oxygen atoms (#NandO)5
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
O43570CA12Carbonic anhydrase XIIT16987SEA
Q16790CA9Carbonic anhydrase IXT64567SEA
P43166CA7Carbonic anhydrase VIIT37541SEA
Q9ULX7CA14Carbonic anhydrase XIVT31992SEA
P22748CA4Carbonic anhydrase IVT53378SEA
P27338MAOBMonoamine oxidase BT83011SEA
O15427SLC16A3Monocarboxylate transporter 4T31788SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T16987DI0046Bacterial infection[ICD-11: 1A00-1C4Z]O43570CA12
T16987DI0372Seborrhoeic dermatitis[ICD-11: EA81]O43570CA12
T64567DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]Q16790CA9
T31992DI0046Bacterial infection[ICD-11: 1A00-1C4Z]Q9ULX7CA14
T31992DI0204Inborn metabolism deficiency[ICD-11: 5C50-5C59]Q9ULX7CA14
T53378DI0046Bacterial infection[ICD-11: 1A00-1C4Z]P22748CA4
T53378DI0166Glaucoma[ICD-11: 9C61]P22748CA4
T53378DI0372Seborrhoeic dermatitis[ICD-11: EA81]P22748CA4
T83011DI0115Dementia[ICD-11: 6D80-6D8Z]P27338MAOB
T83011DI0117Depression[ICD-11: 6A70-6A7Z]P27338MAOB
T83011DI0190Hypertension[ICD-11: BA00-BA04]P27338MAOB
T83011DI0243Malaria[ICD-11: 1F40-1F45]P27338MAOB
T83011DI0264Migraine[ICD-11: 8A80]P27338MAOB
T83011DI0331Parkinsonism[ICD-11: 8A00]P27338MAOB

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