Capsidiol



Compound IDCDAMM02137
Common nameCapsidiol
IUPAC name4,4a-dimethyl-6-prop-1-en-2-yl-2,3,4,5,6,7-hexahydro-1H-naphthalene-1,3-diol
Molecular formulaC15H24O2

Experimental data

Retention time8.47
Adduct[M+H]+
Actual mz237.185
Theoretical mz237.185
Error0.52
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.9079

Identifiers and class information

Inchi keyBXXSHQYDJWZXPB-OKNSCYNVSA-N
SmilesOC1C2=CCC(C(=C)C)CC2(C)C(C)C(O)C1
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)3
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)236.353
Computed dipole moment(dipole)3.593
Total solvent accessible surface area (SASA)481.301
Hydrophobic component of SASA (FOSA)346.998
Hydrophilic component of SASA (FISA)77.85
Pie component of the SASA (PISA)56.453
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)854.763
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)3.4
Free energy of solvation of dipole (dip^2/V)0.0151023
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0099903
Globularity descriptor (glob)0.904993
Predicted polarizability in cubic angstroms (QPpolrz)26.666
Predicted hexadecane/gas partition coefficient (QPlogPC16)7.783
Predicted octanol/gas partition coefficient (QPlogPoct)13.107
Predicted water/gas partition coefficient (QPlogPw)7.407
Predicted octanol/water partition coefficient (QPlogPo/w)2.586
Predicted aqueous solubility (QPlogS)-3.265
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.683
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.339
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)1809.89
Predicted brain/blood partition coefficient (QPlogBB)-0.251
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)939.379
Predicted skin permeability, log Kp (QPlogKp)-2.467
PM3 calculated ionization potential (IP(ev))9.88
PM3 calculated electron affinity (EA(eV))-0.663
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)0.126
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)40.482
Number of nitrogen and oxygen atoms (#NandO)2
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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