Senkyunolide A



Compound IDCDAMM02122
Common nameSenkyunolide A
IUPAC name3-butyl-4,5-dihydro-3H-2-benzofuran-1-one
Molecular formulaC12H16O2

Experimental data

Retention time7.49
Adduct[M+H]+
Actual mz193.122
Theoretical mz193.122
Error0.64
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.9366

Identifiers and class information

Inchi keyZPIKVDODKLJKIN-LDGXTIHJNA-N
SmilesO=C1OC(C2=C1C=CCC2)CCCC
SuperclassOrganoheterocyclic compounds
ClassIsobenzofurans

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)3
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)192.257
Computed dipole moment(dipole)6.642
Total solvent accessible surface area (SASA)451.923
Hydrophobic component of SASA (FOSA)303.781
Hydrophilic component of SASA (FISA)65.979
Pie component of the SASA (PISA)82.162
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)741.313
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)3
Free energy of solvation of dipole (dip^2/V)0.0595191
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.876534
Predicted polarizability in cubic angstroms (QPpolrz)22.372
Predicted hexadecane/gas partition coefficient (QPlogPC16)6.108
Predicted octanol/gas partition coefficient (QPlogPoct)8.972
Predicted water/gas partition coefficient (QPlogPw)4.108
Predicted octanol/water partition coefficient (QPlogPo/w)2.31
Predicted aqueous solubility (QPlogS)-2.722
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.109
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.922
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2345.42
Predicted brain/blood partition coefficient (QPlogBB)-0.19
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1243.13
Predicted skin permeability, log Kp (QPlogKp)-2.158
PM3 calculated ionization potential (IP(ev))9.455
PM3 calculated electron affinity (EA(eV))0.708
Number of likely metabolic reactions (#metab)3
Prediction of binding to human serum albumin (QPlogKhsa)-0.16
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)41.145
Number of nitrogen and oxygen atoms (#NandO)2
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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