trans-3-Hexenyl acetate



Compound IDCDAMM02105
Common nametrans-3-Hexenyl acetate
IUPAC namehex-3-enyl acetate
Molecular formulaC8H14O2

Experimental data

Retention time7.5
Adduct[M+Na]+
Actual mz165.088
Theoretical mz165.088
Error0.11
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.2262

Identifiers and class information

Inchi keyNPFVOOAXDOBMCE-SNAWJCMRSA-N
SmilesO=C(OCCC=CCC)C
SuperclassOrganic acids and derivatives
ClassCarboxylic acids and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)2
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)4
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)142.197
Computed dipole moment(dipole)2.975
Total solvent accessible surface area (SASA)437.557
Hydrophobic component of SASA (FOSA)353.722
Hydrophilic component of SASA (FISA)68.287
Pie component of the SASA (PISA)15.547
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)665.475
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)2
Free energy of solvation of dipole (dip^2/V)0.0133
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.842464
Predicted polarizability in cubic angstroms (QPpolrz)18.058
Predicted hexadecane/gas partition coefficient (QPlogPC16)4.606
Predicted octanol/gas partition coefficient (QPlogPoct)6.066
Predicted water/gas partition coefficient (QPlogPw)2.43
Predicted octanol/water partition coefficient (QPlogPo/w)2.208
Predicted aqueous solubility (QPlogS)-2.811
Conformation-independent predicted aqueous solubility (CIQPlogS)-1.165
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.155
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2230.13
Predicted brain/blood partition coefficient (QPlogBB)-0.319
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1177.21
Predicted skin permeability, log Kp (QPlogKp)-2.339
PM3 calculated ionization potential (IP(ev))10.044
PM3 calculated electron affinity (EA(eV))-0.805
Number of likely metabolic reactions (#metab)2
Prediction of binding to human serum albumin (QPlogKhsa)-0.155
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)38.949
Number of nitrogen and oxygen atoms (#NandO)2
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q8TDS5OXER1Oxoeicosanoid receptor 1T68834SEA
Q9HBW0LPAR2Lysophosphatidic acid receptor Edg-4T39380SEA
Q9UBY5LPAR3Lysophosphatidic acid receptor Edg-7T95923SEA
P28476GABRR2GABA(A) receptor rho2T90682SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T95923DI0146Fibrosis[ICD-11: GA14-GC01]Q9UBY5LPAR3
T95923DI0399Systemic sclerosis[ICD-11: 4A42]Q9UBY5LPAR3

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