Citronellyl propionate



Compound IDCDAMM02097
Common nameCitronellyl propionate
IUPAC name3,7-dimethyloct-6-enyl propanoate
Molecular formulaC13H24O2

Experimental data

Retention time4.75
Adduct[M+H]+
Actual mz213.186
Theoretical mz213.185
Error1.99
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.7233

Identifiers and class information

Inchi keyPOPNTVRHTZDEBW-UHFFFAOYNA-N
SmilesO=C(OCCC(C)CCC=C(C)C)CC
SuperclassLipids and lipid-like molecules
ClassFatty Acyls

Pharmacokinetic properties

Number of descriptor values(#stars)2
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)7
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)212.331
Computed dipole moment(dipole)3.075
Total solvent accessible surface area (SASA)570.373
Hydrophobic component of SASA (FOSA)499.838
Hydrophilic component of SASA (FISA)57.607
Pie component of the SASA (PISA)12.928
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)936.208
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)2
Free energy of solvation of dipole (dip^2/V)0.0101024
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.811436
Predicted polarizability in cubic angstroms (QPpolrz)26.942
Predicted hexadecane/gas partition coefficient (QPlogPC16)7.264
Predicted octanol/gas partition coefficient (QPlogPoct)8.9
Predicted water/gas partition coefficient (QPlogPw)1.997
Predicted octanol/water partition coefficient (QPlogPo/w)4.045
Predicted aqueous solubility (QPlogS)-4.839
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.654
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.645
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2815.86
Predicted brain/blood partition coefficient (QPlogBB)-0.442
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1514.7
Predicted skin permeability, log Kp (QPlogKp)-1.864
PM3 calculated ionization potential (IP(ev))9.57
PM3 calculated electron affinity (EA(eV))-0.979
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)0.504
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)37.289
Number of nitrogen and oxygen atoms (#NandO)2
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q14191WRNWerner syndrome ATP-dependent helicaseT47583SEA
P21757MSR1Macrophage scavenger receptor types I and IIT50007SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T47583DI0251Mature T-cell lymphoma[ICD-11: 2A90]Q14191WRN

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