1-Deoxy-D-glucitol



Compound IDCDAMM02082
Common name1-Deoxy-D-glucitol
IUPAC namehexane-1,2,3,4,5-pentol
Molecular formulaC6H14O5

Experimental data

Retention time0.53
Adduct[M+NH4]+
Actual mz184.117
Theoretical mz184.118
Error3.38
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.2332

Identifiers and class information

Inchi keySKCKOFZKJLZSFA-UHFFFAOYNA-N
SmilesOCC(O)C(O)C(O)C(O)C
SuperclassOrganic oxygen compounds
ClassOrganooxygen compounds

Pharmacokinetic properties

Number of descriptor values(#stars)3
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)9
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)166.174
Computed dipole moment(dipole)2.294
Total solvent accessible surface area (SASA)374.812
Hydrophobic component of SASA (FOSA)176.515
Hydrophilic component of SASA (FISA)198.297
Pie component of the SASA (PISA)0
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)591.979
Number of hydrogen bond donors (donorHB)5
Number of hydrogen bond acceptors (accptHB)8.5
Free energy of solvation of dipole (dip^2/V)0.0088906
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0507097
Globularity descriptor (glob)0.909681
Predicted polarizability in cubic angstroms (QPpolrz)11.758
Predicted hexadecane/gas partition coefficient (QPlogPC16)6.304
Predicted octanol/gas partition coefficient (QPlogPoct)15.184
Predicted water/gas partition coefficient (QPlogPw)15.68
Predicted octanol/water partition coefficient (QPlogPo/w)-1.605
Predicted aqueous solubility (QPlogS)-0.465
Conformation-independent predicted aqueous solubility (CIQPlogS)-0.436
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-2.993
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)130.452
Predicted brain/blood partition coefficient (QPlogBB)-1.576
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)54.734
Predicted skin permeability, log Kp (QPlogKp)-4.31
PM3 calculated ionization potential (IP(ev))10.888
PM3 calculated electron affinity (EA(eV))-1.971
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)-1.044
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)55.412
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)104.77
Number of nitrogen and oxygen atoms (#NandO)5
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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