3,3\'-Dihydroxy-4\',5,7-trimethoxyflavan



Compound IDCDAMM02015
Common name3,3\'-Dihydroxy-4\',5,7-trimethoxyflavan
IUPAC name2-(3-hydroxy-4-methoxyphenyl)-5,7-dimethoxy-3,4-dihydro-2H-chromen-3-ol
Molecular formulaC18H20O6

Experimental data

Retention time17.43
Adduct[M+K]+
Actual mz371.093
Theoretical mz371.089
Error11.16
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.2444

Identifiers and class information

Inchi keyWCBCDLSKTYUDDL-UHFFFAOYNA-N
SmilesOC1=CC(=CC=C1OC)C2OC=3C=C(OC)C=C(OC)C3CC2O
SuperclassPhenylpropanoids and polyketides
ClassFlavonoids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)5
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)332.352
Computed dipole moment(dipole)2.505
Total solvent accessible surface area (SASA)599.811
Hydrophobic component of SASA (FOSA)349.113
Hydrophilic component of SASA (FISA)90.686
Pie component of the SASA (PISA)160.012
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1044.72
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)5.45
Free energy of solvation of dipole (dip^2/V)0.0060062
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0128498
Globularity descriptor (glob)0.830138
Predicted polarizability in cubic angstroms (QPpolrz)33.973
Predicted hexadecane/gas partition coefficient (QPlogPC16)10.111
Predicted octanol/gas partition coefficient (QPlogPoct)16.633
Predicted water/gas partition coefficient (QPlogPw)10.062
Predicted octanol/water partition coefficient (QPlogPo/w)2.987
Predicted aqueous solubility (QPlogS)-4.397
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.525
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.044
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)1367.5
Predicted brain/blood partition coefficient (QPlogBB)-0.615
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)693.857
Predicted skin permeability, log Kp (QPlogKp)-2.147
PM3 calculated ionization potential (IP(ev))8.816
PM3 calculated electron affinity (EA(eV))0.008
Number of likely metabolic reactions (#metab)7
Prediction of binding to human serum albumin (QPlogKhsa)0.168
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)72.943
Number of nitrogen and oxygen atoms (#NandO)6
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P11926ODC1Ornithine decarboxylaseT60366SEA
P33527ABCC1Multidrug resistance-associated protein 1T11288SEA
P08183ABCB1P-glycoprotein 1T25258SEA
P18054ALOX12Arachidonate 12-lipoxygenaseT35527SEA
P15692VEGFAVascular endothelial growth factor AT20761SEA
P49763PGFPlacenta growth factorT70792SEA
Q9UNQ0ABCG2ATP-binding cassette sub-family G member 2T56556SEA
P60842EIF4A1Eukaryotic initiation factor 4A-IT86805SEA
P52209PGD6-phosphogluconate dehydrogenaseT76497SEA
Q16678CYP1B1Cytochrome P450 1B1T92521SEA
Q9H4B7TUBB1Tubulin beta-1 chainT84397SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T60366DI0020African trypanosomiasis[ICD-11: 1F51]P11926ODC1
T11288DI0167Gout[ICD-11: FA25]P33527ABCC1
T25258DI0238Lung cancer[ICD-11: 2C25]P08183ABCB1
T20761DI0095Colorectal cancer[ICD-11: 2B91]P15692VEGFA
T20761DI0365Retinopathy[ICD-11: 9B71]P15692VEGFA
T20761DI0430Vascular system developmental anomaly[ICD-11: LA90]P15692VEGFA
T70792DI0095Colorectal cancer[ICD-11: 2B91]P49763PGF
T56556DI0218Irritable bowel syndrome[ICD-11: DD91]Q9UNQ0ABCG2
T56556DI0366Rheumatoid arthritis[ICD-11: FA20]Q9UNQ0ABCG2
T86805DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P60842EIF4A1
T76497DI0337Pituitary gland disorder[ICD-11: 5A60-5A61]P52209PGD
T84397DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]Q9H4B7TUBB1

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