Voamatin D



Compound IDCDAMM01946
Common nameVoamatin D
IUPAC name[4-acetyloxy-8-formyl-14-(furan-3-yl)-6,6,9,13-tetramethyl-18-methylidene-10,16-dioxo-2,7,15-trioxatetracyclo[9.6.1.01,13.03,9]octadecan-5-yl] 3-phenylprop-2-enoate
Molecular formulaC36H38O11

Experimental data

Retention time22.91
Adduct[M+H]+
Actual mz647.254
Theoretical mz647.248
Error8.38
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.3306

Identifiers and class information

Inchi keyUFKGYGLEFOYVQH-DNLSRKNONA-N
SmilesO=CC1OC(C)(C)C(OC(=O)C=CC=2C=CC=CC2)C(OC(=O)C)C3OC45C(=C)C(C(=O)C13C)CC5(C)C(OC(=O)C4)C6=COC=C6
SuperclassPhenylpropanoids and polyketides
ClassCinnamic acids and derivatives

Plant source

  • Curcuma longa L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)1
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)0
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)6
    Number of reactive functional groups (#rtvFG)3
    Predicted central nervous system activity (CNS)-2
    Molecular weight (mol_MW)646.69
    Computed dipole moment(dipole)1.792
    Total solvent accessible surface area (SASA)891.865
    Hydrophobic component of SASA (FOSA)376.295
    Hydrophilic component of SASA (FISA)164.3
    Pie component of the SASA (PISA)351.27
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)1804.11
    Number of hydrogen bond donors (donorHB)0
    Number of hydrogen bond acceptors (accptHB)13
    Free energy of solvation of dipole (dip^2/V)0.0017809
    Index of cohesive interaction in solids (ACxDN^.5/SA)0
    Globularity descriptor (glob)0.803604
    Predicted polarizability in cubic angstroms (QPpolrz)65.549
    Predicted hexadecane/gas partition coefficient (QPlogPC16)18.411
    Predicted octanol/gas partition coefficient (QPlogPoct)29.629
    Predicted water/gas partition coefficient (QPlogPw)16.854
    Predicted octanol/water partition coefficient (QPlogPo/w)4.008
    Predicted aqueous solubility (QPlogS)-5.334
    Conformation-independent predicted aqueous solubility (CIQPlogS)-7.198
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-6.385
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)274.057
    Predicted brain/blood partition coefficient (QPlogBB)-1.494
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)122.102
    Predicted skin permeability, log Kp (QPlogKp)-2.734
    PM3 calculated ionization potential (IP(ev))9.47
    PM3 calculated electron affinity (EA(eV))0.921
    Number of likely metabolic reactions (#metab)7
    Prediction of binding to human serum albumin (QPlogKhsa)0.123
    Predicted qualitative human oral absorption (HumanOralAbsorption)2
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)68.131
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)174.208
    Number of nitrogen and oxygen atoms (#NandO)11
    Number of violations of Lipinski’s rule of five (RuleOfFive)2
    Number of violations of Jorgensen’s rule of three (RuleOfThree)1

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source
    P08183ABCB1P-glycoprotein 1T25258SEA

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
    T25258DI0238Lung cancer[ICD-11: 2C25]P08183ABCB1

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