Sanguiin H2



Compound IDCDAMM01914
Common nameSanguiin H2
IUPAC name3-[[7,8,9,12,13,14,28,29,30,33,34,35-dodecahydroxy-4,17,25,38-tetraoxo-20-(3,4,5-trihydroxybenzoyl)oxy-3,18,21,24,39-pentaoxaheptacyclo[20.17.0.02,19.05,10.011,16.026,31.032,37]nonatriaconta-5,7,9,11,13,15,26,28,30,32(37),33,35-dodecaen-36-yl]oxy]-4,5-dihydroxybenzoic acid
Molecular formulaC48H32O31

Experimental data

Retention time19.46
Adduct[M+2H]2+
Actual mz553.057
Theoretical mz553.052
Error7.64
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.6621

Identifiers and class information

Inchi keyVQIUUNUVZNWSSC-UHFFFAOYNA-N
SmilesO=C(O)C1=CC(O)=C(O)C(OC=2C(O)=C(O)C(O)=C3C2C(=O)OC4C(OC(OC(=O)C5=CC(O)=C(O)C(O)=C5)C6OC(=O)C7=CC(O)=C(O)C(O)=C7C8=C(O)C(O)=C(O)C=C8C(=O)OC64)COC(=O)C9=CC(O)=C(O)C(O)=C93)=C1
SuperclassPhenylpropanoids and polyketides
ClassTannins

Plant source

  • Curcuma longa L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)16
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)1
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)22
    Number of reactive functional groups (#rtvFG)6
    Predicted central nervous system activity (CNS)-2
    Molecular weight (mol_MW)1104.76
    Computed dipole moment(dipole)8.162
    Total solvent accessible surface area (SASA)1085.87
    Hydrophobic component of SASA (FOSA)72.35
    Hydrophilic component of SASA (FISA)833.571
    Pie component of the SASA (PISA)179.952
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)2375.32
    Number of hydrogen bond donors (donorHB)18
    Number of hydrogen bond acceptors (accptHB)26.95
    Free energy of solvation of dipole (dip^2/V)0.0280457
    Index of cohesive interaction in solids (ACxDN^.5/SA)0.105297
    Globularity descriptor (glob)0.792869
    Predicted polarizability in cubic angstroms (QPpolrz)76.499
    Predicted hexadecane/gas partition coefficient (QPlogPC16)30.723
    Predicted octanol/gas partition coefficient (QPlogPoct)70.304
    Predicted water/gas partition coefficient (QPlogPw)57.282
    Predicted octanol/water partition coefficient (QPlogPo/w)-4.103
    Predicted aqueous solubility (QPlogS)-2.399
    Conformation-independent predicted aqueous solubility (CIQPlogS)-10.993
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.934
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)0
    Predicted brain/blood partition coefficient (QPlogBB)-9.603
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)0
    Predicted skin permeability, log Kp (QPlogKp)-14.136
    PM3 calculated ionization potential (IP(ev))9.111
    PM3 calculated electron affinity (EA(eV))1.255
    Number of likely metabolic reactions (#metab)17
    Prediction of binding to human serum albumin (QPlogKhsa)-1.55
    Predicted qualitative human oral absorption (HumanOralAbsorption)1
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)0
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)555.201
    Number of nitrogen and oxygen atoms (#NandO)31
    Number of violations of Lipinski’s rule of five (RuleOfFive)3
    Number of violations of Jorgensen’s rule of three (RuleOfThree)2

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source
    P06746POLBDNA polymerase beta (by homology)T06958SEA
    Q14534SQLESqualene monooxygenase (by homology)T93344SwissTargetPrediction
    P05121SERPINE1Plasminogen activator inhibitor-1T15556SEA
    P52209PGD6-phosphogluconate dehydrogenaseT76497SEA
    Q99417MYCBPMYCBP messenger RNAT37298SEA

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
    T06958DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P06746POLB
    T93344DI0118Dermatophytosis[ICD-11: 1F28]Q14534SQLE
    T93344DI0385Skin fungal infection disorder[ICD-11: EA60]Q14534SQLE
    T15556DI0037Asthma[ICD-11: CA23]P05121SERPINE1
    T15556DI0405Thrombosis[ICD-11: DB61-GB90]P05121SERPINE1
    T76497DI0337Pituitary gland disorder[ICD-11: 5A60-5A61]P52209PGD
    T37298DI0235Liver cancer[ICD-11: 2C12]Q99417MYCBP

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