Ixerisoside K



Compound IDCDAMM01901
Common nameIxerisoside K
IUPAC name[4,5-dihydroxy-6-(3-methoxy-3-oxoprop-1-en-2-yl)-8a-methyl-4-[[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]-1,2,3,4a,5,6,7,8-octahydronaphthalen-1-yl] 2-hydroxy-3-(4-hydroxyphenyl)propanoate
Molecular formulaC31H44O14

Experimental data

Retention time8.15
Adduct[M+H]+
Actual mz641.277
Theoretical mz641.28
Error4.48
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.149

Identifiers and class information

Inchi keyHQGIZPPLRDFZMV-MZACWTJDNA-N
SmilesO=C(OC)C(=C)C1CCC2(C)C(OC(=O)C(O)CC3=CC=C(O)C=C3)CCC(O)(COC4OC(CO)C(O)C(O)C4O)C2C1O
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)8
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)18
Number of reactive functional groups (#rtvFG)3
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)640.68
Computed dipole moment(dipole)5.201
Total solvent accessible surface area (SASA)903.771
Hydrophobic component of SASA (FOSA)408.291
Hydrophilic component of SASA (FISA)364.81
Pie component of the SASA (PISA)130.671
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1802.61
Number of hydrogen bond donors (donorHB)8
Number of hydrogen bond acceptors (accptHB)19.1
Free energy of solvation of dipole (dip^2/V)0.0150084
Index of cohesive interaction in solids (ACxDN^.5/SA)0.059775
Globularity descriptor (glob)0.792577
Predicted polarizability in cubic angstroms (QPpolrz)55.677
Predicted hexadecane/gas partition coefficient (QPlogPC16)20.167
Predicted octanol/gas partition coefficient (QPlogPoct)41.453
Predicted water/gas partition coefficient (QPlogPw)31.824
Predicted octanol/water partition coefficient (QPlogPo/w)-0.366
Predicted aqueous solubility (QPlogS)-3.175
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.587
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.511
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)3.439
Predicted brain/blood partition coefficient (QPlogBB)-4.393
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1.075
Predicted skin permeability, log Kp (QPlogKp)-6.054
PM3 calculated ionization potential (IP(ev))9.196
PM3 calculated electron affinity (EA(eV))-0.149
Number of likely metabolic reactions (#metab)10
Prediction of binding to human serum albumin (QPlogKhsa)-0.908
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)0
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)244.673
Number of nitrogen and oxygen atoms (#NandO)14
Number of violations of Lipinski’s rule of five (RuleOfFive)3
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P15692VEGFAVascular endothelial growth factor AT20761SEA
P05230FGF1Acidic fibroblast growth factorT18639SEA
P09038FGF2Basic fibroblast growth factorT31621SEA
P60568IL2Interleukin-2T61698SEA
P17931LGALS3Galectin-3T72038SEA
P14679TYRTyrosinaseT97035SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T20761DI0095Colorectal cancer[ICD-11: 2B91]P15692VEGFA
T20761DI0365Retinopathy[ICD-11: 9B71]P15692VEGFA
T20761DI0430Vascular system developmental anomaly[ICD-11: LA90]P15692VEGFA
T18639DI0081Chronic arterial occlusive disease[ICD-11: BD4Z]P05230FGF1
T18639DI0102Coronary atherosclerosis[ICD-11: BA52]P05230FGF1
T31621DI0005Acne vulgaris[ICD-11: ED80]P09038FGF2
T61698DI0275Multiple sclerosis[ICD-11: 8A40]P60568IL2
T61698DI0361Renal cell carcinoma[ICD-11: 2C90]P60568IL2
T72038DI0190Hypertension[ICD-11: BA00-BA04]P17931LGALS3
T72038DI0199Idiopathic interstitial pneumonitis[ICD-11: CB03]P17931LGALS3
T72038DI0252Melanoma[ICD-11: 2C30]P17931LGALS3
T72038DI0302Non-alcoholic fatty liver disease[ICD-11: DB92]P17931LGALS3
T72038DI0351Psoriasis[ICD-11: EA90]P17931LGALS3
T97035DI0007Acquired hypermelanosis[ICD-11: ED60]P14679TYR
T97035DI0008Acquired hypomelanotic disorder[ICD-11: ED63]P14679TYR

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