Granaxylocarpin B



Compound IDCDAMM01823
Common nameGranaxylocarpin B
IUPAC name[[1-(furan-3-yl)-5-hydroxy-8a-methyl-3,6-dioxo-7,8-dihydro-1H-isochromen-5-yl]-[4-(2-methoxy-2-oxoethyl)-3,3,5-trimethyl-6-oxocyclohexen-1-yl]methyl] 2-methylbut-2-enoate
Molecular formulaC32H38O10

Experimental data

Retention time12.74
Adduct[M+H]+
Actual mz583.257
Theoretical mz583.253
Error6.04
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.0998

Identifiers and class information

Inchi keyZBJPDPDKXYNWFV-KPEUDGMGNA-N
SmilesO=C1OC(C2=COC=C2)C3(C(=C1)C(O)(C(=O)CC3)C(OC(=O)C(=CC)C)C4=CC(C)(C)C(CC(=O)OC)C(C4=O)C)C
SuperclassOrganic acids and derivatives
ClassCarboxylic acids and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)2
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)7
Number of reactive functional groups (#rtvFG)3
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)582.646
Computed dipole moment(dipole)12.731
Total solvent accessible surface area (SASA)865.975
Hydrophobic component of SASA (FOSA)554.346
Hydrophilic component of SASA (FISA)175.54
Pie component of the SASA (PISA)136.089
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1724.53
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)12.25
Free energy of solvation of dipole (dip^2/V)0.0939826
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0141459
Globularity descriptor (glob)0.803107
Predicted polarizability in cubic angstroms (QPpolrz)59.667
Predicted hexadecane/gas partition coefficient (QPlogPC16)16.532
Predicted octanol/gas partition coefficient (QPlogPoct)29.513
Predicted water/gas partition coefficient (QPlogPw)15.91
Predicted octanol/water partition coefficient (QPlogPo/w)3.852
Predicted aqueous solubility (QPlogS)-6.086
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.815
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.367
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)214.416
Predicted brain/blood partition coefficient (QPlogBB)-1.673
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)93.652
Predicted skin permeability, log Kp (QPlogKp)-3.603
PM3 calculated ionization potential (IP(ev))9.681
PM3 calculated electron affinity (EA(eV))0.831
Number of likely metabolic reactions (#metab)9
Prediction of binding to human serum albumin (QPlogKhsa)0.479
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)78.268
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)170.427
Number of nitrogen and oxygen atoms (#NandO)10
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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