Sabadelin



Compound IDCDAMM01822
Common nameSabadelin
IUPAC name2-methyl-4-[14-(3-tetradecyloxiran-2-yl)tetradec-11-enyl]-2H-furan-5-one
Molecular formulaC35H62O3

Experimental data

Retention time16.78
Adduct[M+H]+
Actual mz531.484
Theoretical mz531.477
Error12.46
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.5389

Identifiers and class information

Inchi keyLMDZVARATIVDAM-ATJXCDBQNA-N
SmilesO=C1OC(C=C1CCCCCCCCCCC=CCCC2OC2CCCCCCCCCCCCCC)C
SuperclassLipids and lipid-like molecules
ClassFatty Acyls

Pharmacokinetic properties

Number of descriptor values(#stars)10
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)27
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)530.873
Computed dipole moment(dipole)6.591
Total solvent accessible surface area (SASA)1199.35
Hydrophobic component of SASA (FOSA)1099.63
Hydrophilic component of SASA (FISA)61.578
Pie component of the SASA (PISA)38.146
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)2141.53
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)5
Free energy of solvation of dipole (dip^2/V)0.0202845
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.669939
Predicted polarizability in cubic angstroms (QPpolrz)62.578
Predicted hexadecane/gas partition coefficient (QPlogPC16)20.607
Predicted octanol/gas partition coefficient (QPlogPoct)22.005
Predicted water/gas partition coefficient (QPlogPw)2.253
Predicted octanol/water partition coefficient (QPlogPo/w)10.45
Predicted aqueous solubility (QPlogS)-11.931
Conformation-independent predicted aqueous solubility (CIQPlogS)-8.133
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-7.055
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2582.02
Predicted brain/blood partition coefficient (QPlogBB)-1.978
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1379.21
Predicted skin permeability, log Kp (QPlogKp)0.072
PM3 calculated ionization potential (IP(ev))9.763
PM3 calculated electron affinity (EA(eV))0.431
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)2.351
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)52.479
Number of nitrogen and oxygen atoms (#NandO)3
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
O00519FAAHAnandamide amidohydrolaseT11754SEA
P06746POLBDNA polymerase beta (by homology)T06958SEA
Q99685MGLLMonoglyceride lipaseT18664SEA
Q02156PRKCEProtein kinase C epsilonT00895SEA
Q9Y4D2DAGLASn1-specific diacylglycerol lipase alphaT03150SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T11754DI0101Corneal disease[ICD-11: 9A76-9A78]O00519FAAH
T06958DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P06746POLB
T18664DI0163General pain disorder[ICD-11: 8E43]Q99685MGLL
T18664DI0409Tic disorder[ICD-11: 8A05]Q99685MGLL
T00895DI0033Anxiety disorder[ICD-11: 6B00-6B0Z]Q02156PRKCE
T00895DI0243Malaria[ICD-11: 1F40-1F45]Q02156PRKCE

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