Graviphane



Compound IDCDAMM01797
Common nameGraviphane
IUPAC name2-oxatricyclo[20.2.2.13,7]heptacosa-1(24),3(27),4,6,22,25-hexaene-5,21,24,25-tetrol
Molecular formulaC26H36O5

Experimental data

Retention time10.76
Adduct[M+H]+
Actual mz429.267
Theoretical mz429.263
Error8.21
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.5308

Identifiers and class information

Inchi keyAWTIXPFZVHCLFG-QWVACARCNA-N
SmilesOC=1C=C2OC3=C(O)C=C(C=C3O)C(O)CCCCCCCCCCCCCC(C1)=C2
SuperclassLignans, neolignans and related compounds
Class

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)21
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)428.567
Computed dipole moment(dipole)3.837
Total solvent accessible surface area (SASA)717.188
Hydrophobic component of SASA (FOSA)394.212
Hydrophilic component of SASA (FISA)188.08
Pie component of the SASA (PISA)134.896
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1385.31
Number of hydrogen bond donors (donorHB)4
Number of hydrogen bond acceptors (accptHB)4.45
Free energy of solvation of dipole (dip^2/V)0.0106255
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0124096
Globularity descriptor (glob)0.837972
Predicted polarizability in cubic angstroms (QPpolrz)37.09
Predicted hexadecane/gas partition coefficient (QPlogPC16)14.214
Predicted octanol/gas partition coefficient (QPlogPoct)20.216
Predicted water/gas partition coefficient (QPlogPw)9.251
Predicted octanol/water partition coefficient (QPlogPo/w)4.373
Predicted aqueous solubility (QPlogS)-3.693
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.515
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.797
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)163.057
Predicted brain/blood partition coefficient (QPlogBB)-2.488
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)69.66
Predicted skin permeability, log Kp (QPlogKp)-2.494
PM3 calculated ionization potential (IP(ev))8.805
PM3 calculated electron affinity (EA(eV))0.194
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)0.356
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)92.146
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)94.196
Number of nitrogen and oxygen atoms (#NandO)5
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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