Mellerin A



Compound IDCDAMM01792
Common nameMellerin A
IUPAC name[1,6-dihydroxy-8-(hydroxymethyl)-4,12,12,15-tetramethyl-5-oxo-13-tetracyclo[8.5.0.02,6.011,13]pentadeca-3,8-dienyl] octanoate
Molecular formulaC28H42O6

Experimental data

Retention time16.44
Adduct[M+H]+
Actual mz475.304
Theoretical mz475.305
Error2.26
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.0771

Identifiers and class information

Inchi keyVJTBJVHQCFQKLQ-XYSHQLBDNA-N
SmilesO=C(OC12CC(C)C3(O)C(C=C(CO)CC4(O)C(=O)C(=CC43)C)C1C2(C)C)CCCCCCC
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)11
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)474.636
Computed dipole moment(dipole)4.882
Total solvent accessible surface area (SASA)785.12
Hydrophobic component of SASA (FOSA)619.835
Hydrophilic component of SASA (FISA)141.889
Pie component of the SASA (PISA)23.397
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1522.77
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)7.2
Free energy of solvation of dipole (dip^2/V)0.0156545
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0158839
Globularity descriptor (glob)0.815301
Predicted polarizability in cubic angstroms (QPpolrz)47.947
Predicted hexadecane/gas partition coefficient (QPlogPC16)14.146
Predicted octanol/gas partition coefficient (QPlogPoct)24.001
Predicted water/gas partition coefficient (QPlogPw)11.792
Predicted octanol/water partition coefficient (QPlogPo/w)4.574
Predicted aqueous solubility (QPlogS)-5.917
Conformation-independent predicted aqueous solubility (CIQPlogS)-5.731
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.632
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)447.065
Predicted brain/blood partition coefficient (QPlogBB)-1.523
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)207.225
Predicted skin permeability, log Kp (QPlogKp)-2.996
PM3 calculated ionization potential (IP(ev))9.522
PM3 calculated electron affinity (EA(eV))0.104
Number of likely metabolic reactions (#metab)8
Prediction of binding to human serum albumin (QPlogKhsa)0.78
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)108.217
Number of nitrogen and oxygen atoms (#NandO)6
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q02156PRKCEProtein kinase C epsilonT00895SEA
P05129PRKCGProtein kinase C gammaT47107SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T00895DI0033Anxiety disorder[ICD-11: 6B00-6B0Z]Q02156PRKCE
T00895DI0243Malaria[ICD-11: 1F40-1F45]Q02156PRKCE
T47107DI0012Acute myeloid leukaemia[ICD-11: 2A60]P05129PRKCG
T47107DI0248Mastocytosis[ICD-11: 2A21]P05129PRKCG

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