Hypnumbiflavonoid A



Compound IDCDAMM01750
Common nameHypnumbiflavonoid A
IUPAC name3,5-dihydroxy-2-(4-hydroxyphenyl)-11a-(3,5,7-trihydroxy-4-oxo-2,3-dihydrochromen-2-yl)-2,3,7a,8-tetrahydro-[1]benzofuro[2,3-h]chromene-4,9-dione
Molecular formulaC30H22O12

Experimental data

Retention time2.28
Adduct[M+H]+
Actual mz575.12
Theoretical mz575.118
Error3.87
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.8334

Identifiers and class information

Inchi keyKKFWUGTXANEERY-UHFFFAOYNA-N
SmilesO=C1C=CC2(C=3C(OC2C1)=CC(O)=C4C(=O)C(O)C(OC43)C5=CC=C(O)C=C5)C6OC=7C=C(O)C=C(O)C7C(=O)C6O
SuperclassPhenylpropanoids and polyketides
ClassFlavonoids

Pharmacokinetic properties

Number of descriptor values(#stars)2
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)6
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)574.497
Computed dipole moment(dipole)2.328
Total solvent accessible surface area (SASA)666.173
Hydrophobic component of SASA (FOSA)77.999
Hydrophilic component of SASA (FISA)362.409
Pie component of the SASA (PISA)225.765
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1381.45
Number of hydrogen bond donors (donorHB)4
Number of hydrogen bond acceptors (accptHB)12.65
Free energy of solvation of dipole (dip^2/V)0.0039223
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0379781
Globularity descriptor (glob)0.900468
Predicted polarizability in cubic angstroms (QPpolrz)47.435
Predicted hexadecane/gas partition coefficient (QPlogPC16)16.042
Predicted octanol/gas partition coefficient (QPlogPoct)29.932
Predicted water/gas partition coefficient (QPlogPw)22.318
Predicted octanol/water partition coefficient (QPlogPo/w)0.388
Predicted aqueous solubility (QPlogS)-3.431
Conformation-independent predicted aqueous solubility (CIQPlogS)-7.187
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.219
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)3.624
Predicted brain/blood partition coefficient (QPlogBB)-2.778
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1.138
Predicted skin permeability, log Kp (QPlogKp)-6.827
PM3 calculated ionization potential (IP(ev))9.53
PM3 calculated electron affinity (EA(eV))0.793
Number of likely metabolic reactions (#metab)8
Prediction of binding to human serum albumin (QPlogKhsa)-0.102
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)0.352
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)226.139
Number of nitrogen and oxygen atoms (#NandO)12
Number of violations of Lipinski’s rule of five (RuleOfFive)3
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P22748CA4Carbonic anhydrase IVT53378SEA
P20151KLK2Kallikrein 2T01908SEA
P15692VEGFAVascular endothelial growth factor AT20761SEA
P49763PGFPlacenta growth factorT70792SEA
Q16678CYP1B1Cytochrome P450 1B1T92521SEA
P16152CBR1Carbonyl reductase [NADPH] 1T70518SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T53378DI0046Bacterial infection[ICD-11: 1A00-1C4Z]P22748CA4
T53378DI0166Glaucoma[ICD-11: 9C61]P22748CA4
T53378DI0372Seborrhoeic dermatitis[ICD-11: EA81]P22748CA4
T01908DI0213Innate/adaptive immunodeficiency[ICD-11: 4A00]P20151KLK2
T20761DI0095Colorectal cancer[ICD-11: 2B91]P15692VEGFA
T20761DI0365Retinopathy[ICD-11: 9B71]P15692VEGFA
T20761DI0430Vascular system developmental anomaly[ICD-11: LA90]P15692VEGFA
T70792DI0095Colorectal cancer[ICD-11: 2B91]P49763PGF
T70518DI0037Asthma[ICD-11: CA23]P16152CBR1

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