Orthosiphol W



Compound IDCDAMM01740
Common nameOrthosiphol W
IUPAC name(3,9-diacetyloxy-7-ethenyl-2,5,8a-trihydroxy-1,1,4a,7-tetramethyl-8-oxo-3,4,4b,5,6,9,10,10a-octahydro-2H-phenanthren-4-yl) benzoate
Molecular formulaC31H40O10

Experimental data

Retention time5.03
Adduct[M+K]+
Actual mz611.231
Theoretical mz611.225
Error8.9
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.7523

Identifiers and class information

Inchi keyLOZCNNJQVGZXFP-DKVBIXDNNA-N
SmilesO=C(OC1C(OC(=O)C)C(O)C(C)(C)C2CC(OC(=O)C)C3(O)C(=O)C(C=C)(C)CC(O)C3C12C)C=4C=CC=CC4
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)8
Number of reactive functional groups (#rtvFG)3
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)572.651
Computed dipole moment(dipole)2.162
Total solvent accessible surface area (SASA)801.145
Hydrophobic component of SASA (FOSA)444.701
Hydrophilic component of SASA (FISA)175.811
Pie component of the SASA (PISA)180.633
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1626.23
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)12.15
Free energy of solvation of dipole (dip^2/V)0.0028737
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0262679
Globularity descriptor (glob)0.834784
Predicted polarizability in cubic angstroms (QPpolrz)55.516
Predicted hexadecane/gas partition coefficient (QPlogPC16)16.292
Predicted octanol/gas partition coefficient (QPlogPoct)29.815
Predicted water/gas partition coefficient (QPlogPw)18.668
Predicted octanol/water partition coefficient (QPlogPo/w)3.248
Predicted aqueous solubility (QPlogS)-5.156
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.239
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.067
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)213.147
Predicted brain/blood partition coefficient (QPlogBB)-1.601
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)93.053
Predicted skin permeability, log Kp (QPlogKp)-3.355
PM3 calculated ionization potential (IP(ev))10.055
PM3 calculated electron affinity (EA(eV))0.432
Number of likely metabolic reactions (#metab)3
Prediction of binding to human serum albumin (QPlogKhsa)0.334
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)74.683
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)164.203
Number of nitrogen and oxygen atoms (#NandO)10
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P08183ABCB1P-glycoprotein 1T25258SEA
Q08828ADCY1Brain adenylate cyclase 1T63609SEA
O75908SOAT2Acyl coenzyme A:cholesterol acyltransferase 2T14463SEA
P51843NR0B1Orphan nuclear receptor DAX-1T23191SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T25258DI0238Lung cancer[ICD-11: 2C25]P08183ABCB1
T63609DI0306Nutritional deficiency[ICD-11: 5B50-5B71]Q08828ADCY1
T14463DI0017Adrenal cancer[ICD-11: 2D11]O75908SOAT2

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