3-O-Protocatechuoylceanothic acid



Compound IDCDAMM01731
Common name3-O-Protocatechuoylceanothic acid
IUPAC name16-(3,4-dihydroxybenzoyl)oxy-1,2,14,17,17-pentamethyl-8-prop-1-en-2-ylpentacyclo[11.7.0.02,10.05,9.014,18]icosane-5,15-dicarboxylic acid
Molecular formulaC37H50O8

Experimental data

Retention time14.11
Adduct[M+H]+
Actual mz623.351
Theoretical mz623.358
Error11.51
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.1557

Identifiers and class information

Inchi keyFGJNOXMHWXEMHU-UHFFFAOYNA-N
SmilesO=C(OC1C(C(=O)O)C2(C)C(CCC3(C)C2CCC4C5C(C(=C)C)CCC5(C(=O)O)CCC43C)C1(C)C)C6=CC=C(O)C(O)=C6
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)2
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)2
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)7
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)622.797
Computed dipole moment(dipole)9.02
Total solvent accessible surface area (SASA)872.457
Hydrophobic component of SASA (FOSA)490.047
Hydrophilic component of SASA (FISA)252.289
Pie component of the SASA (PISA)130.121
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1781.1
Number of hydrogen bond donors (donorHB)4
Number of hydrogen bond acceptors (accptHB)7.5
Free energy of solvation of dipole (dip^2/V)0.0456844
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0171928
Globularity descriptor (glob)0.81448
Predicted polarizability in cubic angstroms (QPpolrz)61.874
Predicted hexadecane/gas partition coefficient (QPlogPC16)18.106
Predicted octanol/gas partition coefficient (QPlogPoct)31.883
Predicted water/gas partition coefficient (QPlogPw)16.122
Predicted octanol/water partition coefficient (QPlogPo/w)6.263
Predicted aqueous solubility (QPlogS)-7.796
Conformation-independent predicted aqueous solubility (CIQPlogS)-8.85
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-1.539
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2.574
Predicted brain/blood partition coefficient (QPlogBB)-2.394
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1.272
Predicted skin permeability, log Kp (QPlogKp)-5.039
PM3 calculated ionization potential (IP(ev))9.274
PM3 calculated electron affinity (EA(eV))0.541
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)1.169
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)45.051
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)159.23
Number of nitrogen and oxygen atoms (#NandO)8
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q8TDU6GPBAR1G-protein coupled bile acid receptor 1T86273SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T86273DI0417Type 2 diabetes mellitus[ICD-11: 5A11]Q8TDU6GPBAR1

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