Yunnaneic acid E



Compound IDCDAMM01721
Common nameYunnaneic acid E
IUPAC name6-[3-[1-carboxy-2-(3,4-dihydroxyphenyl)ethoxy]-3-oxoprop-1-enyl]-3-(3,4-dihydroxyphenyl)cyclohex-5-ene-1,2,4-tricarboxylic acid
Molecular formulaC27H24O14

Experimental data

Retention time3.99
Adduct[M+H]+
Actual mz573.116
Theoretical mz573.124
Error13.92
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.6009

Identifiers and class information

Inchi keyJSOPGXFFNOKRAX-FUAGRLKYNA-N
SmilesO=C(OC(C(=O)O)CC1=CC=C(O)C(O)=C1)C=CC2=CC(C(=O)O)C(C3=CC=C(O)C(O)=C3)C(C(=O)O)C2C(=O)O
SuperclassOrganic acids and derivatives
ClassCarboxylic acids and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)7
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)4
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)14
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)572.478
Computed dipole moment(dipole)7.138
Total solvent accessible surface area (SASA)794.489
Hydrophobic component of SASA (FOSA)71.237
Hydrophilic component of SASA (FISA)533.924
Pie component of the SASA (PISA)189.329
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1523.43
Number of hydrogen bond donors (donorHB)8
Number of hydrogen bond acceptors (accptHB)13
Free energy of solvation of dipole (dip^2/V)0.0334492
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0462807
Globularity descriptor (glob)0.805918
Predicted polarizability in cubic angstroms (QPpolrz)47.632
Predicted hexadecane/gas partition coefficient (QPlogPC16)19.265
Predicted octanol/gas partition coefficient (QPlogPoct)36.605
Predicted water/gas partition coefficient (QPlogPw)27.984
Predicted octanol/water partition coefficient (QPlogPo/w)1.146
Predicted aqueous solubility (QPlogS)-3.6
Conformation-independent predicted aqueous solubility (CIQPlogS)-5.948
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)1.655
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)0.001
Predicted brain/blood partition coefficient (QPlogBB)-5.761
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)0
Predicted skin permeability, log Kp (QPlogKp)-9.349
PM3 calculated ionization potential (IP(ev))8.85
PM3 calculated electron affinity (EA(eV))1.638
Number of likely metabolic reactions (#metab)10
Prediction of binding to human serum albumin (QPlogKhsa)-1.147
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)0
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)302.058
Number of nitrogen and oxygen atoms (#NandO)14
Number of violations of Lipinski’s rule of five (RuleOfFive)3
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P02766TTRTransthyretinT86462SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T86462DI0026Amyloidosis[ICD-11: 5D00]P02766TTR

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