6b-Angeloyl-3b,8b,9b-trihydroxy-7(11)-eremophilen-12,8-olide



Compound IDCDAMM01720
Common name6b-Angeloyl-3b,8b,9b-trihydroxy-7(11)-eremophilen-12,8-olide
IUPAC name(6,9,9a-trihydroxy-3,4a,5-trimethyl-2-oxo-5,6,7,8,8a,9-hexahydro-4H-benzo[f][1]benzofuran-4-yl) 2-methylbut-2-enoate
Molecular formulaC20H28O7

Experimental data

Retention time7.42
Adduct[M+K]+
Actual mz419.145
Theoretical mz419.147
Error5.39
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.3461

Identifiers and class information

Inchi keyMSDFIROCDXOIAM-RMKNXTFCNA-N
SmilesO=C(OC1C2=C(C(=O)OC2(O)C(O)C3CCC(O)C(C)C13C)C)C(=CC)C
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)5
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)380.437
Computed dipole moment(dipole)8.12
Total solvent accessible surface area (SASA)590.752
Hydrophobic component of SASA (FOSA)394.797
Hydrophilic component of SASA (FISA)192.208
Pie component of the SASA (PISA)3.747
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1125.92
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)9.15
Free energy of solvation of dipole (dip^2/V)0.0585608
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0268273
Globularity descriptor (glob)0.885996
Predicted polarizability in cubic angstroms (QPpolrz)35.731
Predicted hexadecane/gas partition coefficient (QPlogPC16)10.844
Predicted octanol/gas partition coefficient (QPlogPoct)21.892
Predicted water/gas partition coefficient (QPlogPw)14.777
Predicted octanol/water partition coefficient (QPlogPo/w)1.149
Predicted aqueous solubility (QPlogS)-3.284
Conformation-independent predicted aqueous solubility (CIQPlogS)-3.508
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.395
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)149.002
Predicted brain/blood partition coefficient (QPlogBB)-1.37
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)63.193
Predicted skin permeability, log Kp (QPlogKp)-4.569
PM3 calculated ionization potential (IP(ev))10.3
PM3 calculated electron affinity (EA(eV))0.768
Number of likely metabolic reactions (#metab)6
Prediction of binding to human serum albumin (QPlogKhsa)-0.164
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)72.569
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)122.823
Number of nitrogen and oxygen atoms (#NandO)7
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P19838NFKB1Nuclear factor NF-kappa-B p105 subunitT83145SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T83145DI0218Irritable bowel syndrome[ICD-11: DD91]P19838NFKB1
T83145DI0366Rheumatoid arthritis[ICD-11: FA20]P19838NFKB1

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