Cytochalasin T



Compound IDCDAMM01675
Common nameCytochalasin T
IUPAC name19-benzyl-6-hydroxy-10,16,17-trimethyl-2-oxa-20-azatricyclo[12.7.0.01,18]henicosa-4,12,15-triene-3,21-dione
Molecular formulaC29H37NO4

Experimental data

Retention time4.61
Adduct[2M+Na]+
Actual mz949.534
Theoretical mz949.533
Error1.35
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.4467

Identifiers and class information

Inchi keyILLALIWIXIHHKP-LRWVOIBNNA-N
SmilesO=C1OC23C(=O)NC(CC=4C=CC=CC4)C3C(C(=CC2C=CCC(C)CCCC(O)C=C1)C)C
SuperclassOrganoheterocyclic compounds
ClassIsoindoles and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)1
Number of rotatable bonds (#rotor)3
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)463.616
Computed dipole moment(dipole)5.04
Total solvent accessible surface area (SASA)740.123
Hydrophobic component of SASA (FOSA)432.439
Hydrophilic component of SASA (FISA)83.386
Pie component of the SASA (PISA)224.298
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1440.1
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)6.2
Free energy of solvation of dipole (dip^2/V)0.0176384
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0118468
Globularity descriptor (glob)0.833277
Predicted polarizability in cubic angstroms (QPpolrz)51.695
Predicted hexadecane/gas partition coefficient (QPlogPC16)14.14
Predicted octanol/gas partition coefficient (QPlogPoct)23.694
Predicted water/gas partition coefficient (QPlogPw)13.958
Predicted octanol/water partition coefficient (QPlogPo/w)4.657
Predicted aqueous solubility (QPlogS)-5.999
Conformation-independent predicted aqueous solubility (CIQPlogS)-5.64
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.925
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)979.592
Predicted brain/blood partition coefficient (QPlogBB)-0.418
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)824.316
Predicted skin permeability, log Kp (QPlogKp)-1.978
PM3 calculated ionization potential (IP(ev))9.314
PM3 calculated electron affinity (EA(eV))0.332
Number of likely metabolic reactions (#metab)6
Prediction of binding to human serum albumin (QPlogKhsa)0.835
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)26.898
Van der Waals surface area (PSA)74.238
Number of nitrogen and oxygen atoms (#NandO)5
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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