Dolichantoside



Compound IDCDAMM01611
Common nameDolichantoside
IUPAC namemethyl 3-ethenyl-4-[(2-methyl-1,3,4,9-tetrahydropyrido[3,4-b]indol-1-yl)methyl]-2-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-5-carboxylate
Molecular formulaC28H36N2O9

Experimental data

Retention time3.6
Adduct[M+H]+
Actual mz545.252
Theoretical mz545.249
Error5.73
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.2825

Identifiers and class information

Inchi keySLMISZLSXLAAKK-OFHSULMRNA-N
SmilesO=C(OC)C1=COC(OC2OC(CO)C(O)C(O)C2O)C(C=C)C1CC3C=4NC=5C=CC=CC5C4CCN3C
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)1
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)11
Number of reactive functional groups (#rtvFG)3
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)544.6
Computed dipole moment(dipole)7.701
Total solvent accessible surface area (SASA)852.828
Hydrophobic component of SASA (FOSA)447.664
Hydrophilic component of SASA (FISA)201.145
Pie component of the SASA (PISA)204.019
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1613.57
Number of hydrogen bond donors (donorHB)5
Number of hydrogen bond acceptors (accptHB)15.9
Free energy of solvation of dipole (dip^2/V)0.036757
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0416889
Globularity descriptor (glob)0.780123
Predicted polarizability in cubic angstroms (QPpolrz)53.307
Predicted hexadecane/gas partition coefficient (QPlogPC16)17.305
Predicted octanol/gas partition coefficient (QPlogPoct)34.217
Predicted water/gas partition coefficient (QPlogPw)25.085
Predicted octanol/water partition coefficient (QPlogPo/w)0.748
Predicted aqueous solubility (QPlogS)-3.202
Conformation-independent predicted aqueous solubility (CIQPlogS)-3.573
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-6.789
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)30.573
Predicted brain/blood partition coefficient (QPlogBB)-1.904
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)12.62
Predicted skin permeability, log Kp (QPlogKp)-5.514
PM3 calculated ionization potential (IP(ev))7.911
PM3 calculated electron affinity (EA(eV))0.179
Number of likely metabolic reactions (#metab)10
Prediction of binding to human serum albumin (QPlogKhsa)-0.534
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)31.995
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)157.369
Number of nitrogen and oxygen atoms (#NandO)11
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P18825ADRA2CAdrenergic receptor alpha-2T01777SEA
P11387TOP1DNA topoisomerase IT09826SEA
P15692VEGFAVascular endothelial growth factor AT20761SEA
P05230FGF1Acidic fibroblast growth factorT18639SEA
P09038FGF2Basic fibroblast growth factorT31621SEA
P60568IL2Interleukin-2T61698SEA
P17931LGALS3Galectin-3T72038SEA
P04746AMY2APancreatic alpha-amylaseT86918SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T01777DI0166Glaucoma[ICD-11: 9C61]P18825ADRA2C
T01777DI0190Hypertension[ICD-11: BA00-BA04]P18825ADRA2C
T01777DI0196Hypotension[ICD-11: BA20-BA21]P18825ADRA2C
T01777DI0308Obesity[ICD-11: 5B80-5B81]P18825ADRA2C
T01777DI0310Ocular disease[ICD-11: N.A.]P18825ADRA2C
T01777DI0396Substance abuse[ICD-11: 6C40]P18825ADRA2C
T09826DI0046Bacterial infection[ICD-11: 1A00-1C4Z]P11387TOP1
T09826DI0095Colorectal cancer[ICD-11: 2B91]P11387TOP1
T09826DI0238Lung cancer[ICD-11: 2C25]P11387TOP1
T09826DI0321Ovarian cancer[ICD-11: 2C73]P11387TOP1
T09826DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P11387TOP1
T20761DI0095Colorectal cancer[ICD-11: 2B91]P15692VEGFA
T20761DI0365Retinopathy[ICD-11: 9B71]P15692VEGFA
T20761DI0430Vascular system developmental anomaly[ICD-11: LA90]P15692VEGFA
T18639DI0081Chronic arterial occlusive disease[ICD-11: BD4Z]P05230FGF1
T18639DI0102Coronary atherosclerosis[ICD-11: BA52]P05230FGF1
T31621DI0005Acne vulgaris[ICD-11: ED80]P09038FGF2
T61698DI0275Multiple sclerosis[ICD-11: 8A40]P60568IL2
T61698DI0361Renal cell carcinoma[ICD-11: 2C90]P60568IL2
T72038DI0190Hypertension[ICD-11: BA00-BA04]P17931LGALS3
T72038DI0199Idiopathic interstitial pneumonitis[ICD-11: CB03]P17931LGALS3
T72038DI0252Melanoma[ICD-11: 2C30]P17931LGALS3
T72038DI0302Non-alcoholic fatty liver disease[ICD-11: DB92]P17931LGALS3
T72038DI0351Psoriasis[ICD-11: EA90]P17931LGALS3
T86918DI0110Cystic fibrosis[ICD-11: CA25]P04746AMY2A
T86918DI0328Pancreatic malfunction[ICD-11: DC30-DC3Z]P04746AMY2A

Copyright © 2025