Euphornin



Compound IDCDAMM01576
Common nameEuphornin
IUPAC name(4,9,11-triacetyloxy-3a-hydroxy-2,5,8,8,12-pentamethyl-2,3,4,5,9,10,11,13a-octahydro-1H-cyclopenta[12]annulen-1-yl) benzoate
Molecular formulaC33H44O9

Experimental data

Retention time3.4
Adduct[M+H]+
Actual mz585.306
Theoretical mz585.306
Error0.04
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.3018

Identifiers and class information

Inchi keyBRVXVMOWTHQKHC-LVYIKVSWNA-N
SmilesO=C(OC1C2C=C(C)C(OC(=O)C)CC(OC(=O)C)C(C=CC(C)C(OC(=O)C)C2(O)CC1C)(C)C)C=3C=CC=CC3
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)6
Number of reactive functional groups (#rtvFG)4
Predicted central nervous system activity (CNS)-1
Molecular weight (mol_MW)584.705
Computed dipole moment(dipole)1.55
Total solvent accessible surface area (SASA)769.787
Hydrophobic component of SASA (FOSA)509.092
Hydrophilic component of SASA (FISA)112.79
Pie component of the SASA (PISA)147.905
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1669.64
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)8.75
Free energy of solvation of dipole (dip^2/V)0.0014386
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0113668
Globularity descriptor (glob)0.884187
Predicted polarizability in cubic angstroms (QPpolrz)58.225
Predicted hexadecane/gas partition coefficient (QPlogPC16)15.357
Predicted octanol/gas partition coefficient (QPlogPoct)25.951
Predicted water/gas partition coefficient (QPlogPw)12.105
Predicted octanol/water partition coefficient (QPlogPo/w)5.524
Predicted aqueous solubility (QPlogS)-5.981
Conformation-independent predicted aqueous solubility (CIQPlogS)-7.539
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.111
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)843.949
Predicted brain/blood partition coefficient (QPlogBB)-0.76
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)411.819
Predicted skin permeability, log Kp (QPlogKp)-2.501
PM3 calculated ionization potential (IP(ev))9.648
PM3 calculated electron affinity (EA(eV))0.416
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)1.178
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)85.746
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)132.941
Number of nitrogen and oxygen atoms (#NandO)9
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P08183ABCB1P-glycoprotein 1T25258SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T25258DI0238Lung cancer[ICD-11: 2C25]P08183ABCB1

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