8-Hydroxyisocapnolactone-2\',3\'-diol



Compound IDCDAMM01553
Common name8-Hydroxyisocapnolactone-2\',3\'-diol
IUPAC name7-[2,3-dihydroxy-3-methyl-4-(4-methylidene-5-oxooxolan-2-yl)butoxy]-8-hydroxychromen-2-one
Molecular formulaC19H20O8

Experimental data

Retention time0.36
Adduct[M+H]+
Actual mz377.122
Theoretical mz377.123
Error2.85
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.3167

Identifiers and class information

Inchi keyTUZIOBDADOLYSB-YYRNIUEKNA-N
SmilesO=C1OC=2C(O)=C(OCC(O)C(O)(C)CC3OC(=O)C(=C)C3)C=CC2C=C1
SuperclassPhenylpropanoids and polyketides
ClassCoumarins and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)10
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)376.362
Computed dipole moment(dipole)8.696
Total solvent accessible surface area (SASA)663.785
Hydrophobic component of SASA (FOSA)209.575
Hydrophilic component of SASA (FISA)248.527
Pie component of the SASA (PISA)205.684
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1163.52
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)9.45
Free energy of solvation of dipole (dip^2/V)0.0649991
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0246584
Globularity descriptor (glob)0.805974
Predicted polarizability in cubic angstroms (QPpolrz)35.954
Predicted hexadecane/gas partition coefficient (QPlogPC16)12.913
Predicted octanol/gas partition coefficient (QPlogPoct)22.378
Predicted water/gas partition coefficient (QPlogPw)15.902
Predicted octanol/water partition coefficient (QPlogPo/w)0.999
Predicted aqueous solubility (QPlogS)-3.48
Conformation-independent predicted aqueous solubility (CIQPlogS)-3.901
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.652
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)43.563
Predicted brain/blood partition coefficient (QPlogBB)-2.59
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)16.726
Predicted skin permeability, log Kp (QPlogKp)-4.415
PM3 calculated ionization potential (IP(ev))9.13
PM3 calculated electron affinity (EA(eV))0.904
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)-0.442
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)62.13
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)147.533
Number of nitrogen and oxygen atoms (#NandO)8
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
O14980XPO1Exportin-1T51407SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T51407DI0234Liposarcoma[ICD-11: 2B59]O14980XPO1
T51407DI0274Multiple myeloma[ICD-11: 2A83]O14980XPO1
T51407DI0395Stomach cancer[ICD-11: 2B72]O14980XPO1

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