Wulfenoside



Compound IDCDAMM01302
Common nameWulfenoside
IUPAC name[3,4,5-trihydroxy-6-[[5-hydroxy-2-(3-phenylprop-2-enoyloxymethyl)-3,9-dioxatricyclo[4.4.0.02,4]dec-7-en-10-yl]oxy]oxan-2-yl]methyl 7-(hydroxymethyl)-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6-tetrahydrocyclopenta[c]pyran-4-carboxylate
Molecular formulaC40H48O20

Experimental data

Retention time0.29
Adduct[M+K]+
Actual mz887.245
Theoretical mz887.237
Error8.73
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.1159

Identifiers and class information

Inchi keyHNKZOKTVDAPBRD-VAAZKNORNA-N
SmilesO=C(OCC12OC2C(O)C3C=COC(OC4OC(COC(=O)C5=COC(OC6OC(CO)C(O)C(O)C6O)C7=C(CO)CCC57)C(O)C(O)C4O)C31)C=CC=8C=CC=CC8
SuperclassLipids and lipid-like molecules
ClassSaccharolipids

Pharmacokinetic properties

Number of descriptor values(#stars)14
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)23
Number of reactive functional groups (#rtvFG)7
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)848.807
Computed dipole moment(dipole)11.194
Total solvent accessible surface area (SASA)967.179
Hydrophobic component of SASA (FOSA)379.326
Hydrophilic component of SASA (FISA)347.008
Pie component of the SASA (PISA)240.845
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)2109.65
Number of hydrogen bond donors (donorHB)9
Number of hydrogen bond acceptors (accptHB)31.5
Free energy of solvation of dipole (dip^2/V)0.0593923
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0977068
Globularity descriptor (glob)0.822491
Predicted polarizability in cubic angstroms (QPpolrz)65.806
Predicted hexadecane/gas partition coefficient (QPlogPC16)23.257
Predicted octanol/gas partition coefficient (QPlogPoct)54.026
Predicted water/gas partition coefficient (QPlogPw)45.18
Predicted octanol/water partition coefficient (QPlogPo/w)-2.767
Predicted aqueous solubility (QPlogS)-0.46
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.108
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.553
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)5.073
Predicted brain/blood partition coefficient (QPlogBB)-4.242
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1.637
Predicted skin permeability, log Kp (QPlogKp)-4.858
PM3 calculated ionization potential (IP(ev))9.669
PM3 calculated electron affinity (EA(eV))1.004
Number of likely metabolic reactions (#metab)12
Prediction of binding to human serum albumin (QPlogKhsa)-2.085
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)0
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)303.723
Number of nitrogen and oxygen atoms (#NandO)20
Number of violations of Lipinski’s rule of five (RuleOfFive)3
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P15692VEGFAVascular endothelial growth factor AT20761SEA
P05230FGF1Acidic fibroblast growth factorT18639SEA
P09038FGF2Basic fibroblast growth factorT31621SEA
P60568IL2Interleukin-2T61698SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T20761DI0095Colorectal cancer[ICD-11: 2B91]P15692VEGFA
T20761DI0365Retinopathy[ICD-11: 9B71]P15692VEGFA
T20761DI0430Vascular system developmental anomaly[ICD-11: LA90]P15692VEGFA
T18639DI0081Chronic arterial occlusive disease[ICD-11: BD4Z]P05230FGF1
T18639DI0102Coronary atherosclerosis[ICD-11: BA52]P05230FGF1
T31621DI0005Acne vulgaris[ICD-11: ED80]P09038FGF2
T61698DI0275Multiple sclerosis[ICD-11: 8A40]P60568IL2
T61698DI0361Renal cell carcinoma[ICD-11: 2C90]P60568IL2

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